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SCNpilot_expt_500_p_scaffold_28157_1

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: comp(77..1882)

Top 3 Functional Annotations

Value Algorithm Source
TRAG protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH7_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 602.0
  • Bit_score: 979
  • Evalue 1.70e-282
  • rbh
TRAG protein; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 602.0
  • Bit_score: 979
  • Evalue 5.40e-283
  • rbh
TRAG protein {ECO:0000313|EMBL:ABE65020.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 602.0
  • Bit_score: 979
  • Evalue 2.40e-282

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1806
GAAGCTCGCTTCGGCACGGTGATGGAGGCCGCCAGGCAAGGCCTCACCCCTAAGCAGGGCATTGTCCTGGGAACACTGCGGGGCGCCACCATCCGATCGGACGAGCCCGCGCACATCCTCGTCGTCGGCCCCTCACGATCCGGCAAAGGCACCGGCTTCGTTCTTCCGAACGGCTACCTTTGGCAGGGATCGGCCGTGTTTTTCGATCCCAAACGCGAGAACTTCGATGCACTCGCCAACCATCGTGCAACGATGGGCAACAAGGTCTTCATGTTCTCGCCGGGTTCGAACGACACCCACCGCTACAACCCGCTGGACTTCGTGCGCCGCGACGAGCGCATGGCGACGGACTGCTTAGTGGTGGCCTCTTTCGTGATCCCGGAGAAAGCCGACGACACTTGGGCGGGTGCGGGCCGTCTCCTGCTGTCCGCGCTGATCGGCTACGTCCTATCGTCGCCCTTAATTGCGGGCGCACAGCACATGCGCACGGTCGCGCGGATGACCACGACGGGAAAGGACATCTCGTCGGTCTTGCGCGCCATCGTGAAGACCGAAAGCCAGCATTTACCGACCTGGGTGGTCGACAGCTTCAACCAATATATCGCGCTCGAGCCGGAGACGCGCAATTCAGCGGTCTTCAATGTCAATATGGCGATGTCGCTGTGGAACAACGGCCTGATCTCGGCTGCGACCGAGACGTCCGACTTCGACATCCGCGAACTGCGCCGTCAGCCGATGACGATCTTCATCGGCTGCACCATCGCGGAGCTCTCGATCTTCAGGCCTTTGATCCGCATTCTCTTCCAGCAGATCCACGACTTGATGATGGTGAAGATTCCGGGCGAGGACGAAGCCCACCAGGTGCTGCTCATGCTCGATGAATTCTACCACGTCGGTAGGATGGACTCGCTGATCTCGAAGATCACGATCTCAGCGGGCTATGGCTTCCGCATGGCGATTGTTATGCAGGACATCGCGCAGCTCGACGAGCTTTATGGAAAGAACACCCGCATCACCACGGTGTCGGGTTCGCAGATCAAGTTGTTCATCCAGATCAATGACCTCGAAACCTCAGAGTTCGTGTCCGAAATGCTGGGTGAGACCACGCAGGTCTACAAGACGCCGATCCAGCGACCGGGGCAGGGGATCTTCGCGCCGCGCGTCTGGGCGCCGCACTACACGCCCCGGCCGCTGCGCAGTCCGCTCGAGCTTCGGGAAATGTCGGCCAGTCTTTCGATCCTGATGGTGAAGAACTCACGATCGTTCGAGTTGAAGAAAATTCGGCACTATCTCGATAAGCCGTACCGATCATACTATCAAAGGGCAAAAGACACGCCGCTAGTTCCGCCGACGTTACGTGTTTGGCAAGATGAACCGCTGGGTGGCGCCATCAATCCGGTGCCCGATTTGCCGAAGGAAGCGGCCGAGCACGCTGACGCTGTCTTCACGCCGAAAGCGCCGCCAGTCCAAAAGCAAACGCAGCAGCGATCAAGCGGGAAGAAGGCCGAGCCAGTCAAGTCGGTCGCGCCAGCCCCGCAACAAGATACGCCTTTGACGCTGATCCCACGAACAGGCGCTCCAAAGATGGCCAGGAAATCGCTATCGCTGGGCACCGCGCCCCCTGCGCCCGCCGGAGAAAATTGCGACGTACGCGATATTCTAGCTTCCGTTGCGAGTGGCCAAGACGAAGATTTTGCGACGATGATAAACGTGCTCGACACCGCGCCTGCGACAGGAGGAAAGGCGCGGCAGGCTGTCGAAGCGCTCACCTTCCTGCATCAGGCCTTCGGAGATAATGAGAAGTAG
PROTEIN sequence
Length: 602
EARFGTVMEAARQGLTPKQGIVLGTLRGATIRSDEPAHILVVGPSRSGKGTGFVLPNGYLWQGSAVFFDPKRENFDALANHRATMGNKVFMFSPGSNDTHRYNPLDFVRRDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTTTGKDISSVLRAIVKTESQHLPTWVVDSFNQYIALEPETRNSAVFNVNMAMSLWNNGLISAATETSDFDIRELRRQPMTIFIGCTIAELSIFRPLIRILFQQIHDLMMVKIPGEDEAHQVLLMLDEFYHVGRMDSLISKITISAGYGFRMAIVMQDIAQLDELYGKNTRITTVSGSQIKLFIQINDLETSEFVSEMLGETTQVYKTPIQRPGQGIFAPRVWAPHYTPRPLRSPLELREMSASLSILMVKNSRSFELKKIRHYLDKPYRSYYQRAKDTPLVPPTLRVWQDEPLGGAINPVPDLPKEAAEHADAVFTPKAPPVQKQTQQRSSGKKAEPVKSVAPAPQQDTPLTLIPRTGAPKMARKSLSLGTAPPAPAGENCDVRDILASVASGQDEDFATMINVLDTAPATGGKARQAVEALTFLHQAFGDNEK*