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SCNpilot_expt_500_p_scaffold_28400_3

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: comp(1566..1868)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 100.0
  • Bit_score: 184
  • Evalue 8.80e-44
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 100.0
  • Bit_score: 183
  • Evalue 3.40e-44
3-isopropylmalate dehydratase small subunit n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTH5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 100.0
  • Bit_score: 184
  • Evalue 6.30e-44

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Taxonomy

Nitrobacter sp. Nb-311A → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
TCGTTCGGCGACATCTTCTATAACAACTGCTTCAAGAACGGCATTTTGCCGATCCGCGTGTCGCAGGCCGACCTCGACAAGCTGTTCGACGATGCCGAACGCGGCGCCAACGCCACGCTGACGGTCGATCTGGCCAGCCAGGAAATCCGCGGTCCGGACGGCGGCAAGGTCAAGTTCGAGATCGACGCTTTCCGCAAGCACTGCCTGATCAACGGCCTCGACGACATCGGACTGACGATGGAGAAGAAGCCGTCGATCGTCAGCTACGAAGCGAAGGCCAGGGAAGCGCGTCCCTGGGCCTAG
PROTEIN sequence
Length: 101
SFGDIFYNNCFKNGILPIRVSQADLDKLFDDAERGANATLTVDLASQEIRGPDGGKVKFEIDAFRKHCLINGLDDIGLTMEKKPSIVSYEAKAREARPWA*