ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_expt_500_p_scaffold_34211_3

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: 1293..1574

Top 3 Functional Annotations

Value Algorithm Source
UPF0114 protein RPE_2045 n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07PZ5_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 94.0
  • Bit_score: 175
  • Evalue 2.70e-41
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 94.0
  • Bit_score: 175
  • Evalue 8.50e-42
UPF0114 protein RPE_2045 {ECO:0000256|HAMAP-Rule:MF_00143}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 94.0
  • Bit_score: 175
  • Evalue 3.80e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
ATGTCGATGACTCCCGAGACTCCCTTGCCGCCGCGTGGCGTTCGCCTGCGGCCGATCCCGATGCTGATCTTCAGTTCGCGTTGGCTGCAGTTGCCGCTCTATGTCGGCCTTATCGTGGCGCAGGGCGTCTACACCGTCCTGTTCCTCAAAGAGCTCTGGCACCTGATCGGACATACGTTCGACTTCAGCGAACAGCAGATCATGCTGGTGGTGCTGAGCTTGATCGACGTGGTGATGATTTCCAACCTGCTGGTGATGGTGATCGTCGGCGGTTACGAGACA
PROTEIN sequence
Length: 94
MSMTPETPLPPRGVRLRPIPMLIFSSRWLQLPLYVGLIVAQGVYTVLFLKELWHLIGHTFDFSEQQIMLVVLSLIDVVMISNLLVMVIVGGYET