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SCNpilot_expt_500_p_scaffold_33281_2

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: 1064..1618

Top 3 Functional Annotations

Value Algorithm Source
PcaR/PcaU/PobR family beta-ketoadipate pathway transcriptional regulator n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4U3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 177.0
  • Bit_score: 281
  • Evalue 6.90e-73
PcaR/PcaU/PobR family beta-ketoadipate pathway transcriptional regulator {ECO:0000313|EMBL:EKS36516.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 177.0
  • Bit_score: 281
  • Evalue 9.70e-73
IclR family transcriptional regulator; K02624 IclR family transcriptional regulator, pca regulon regulatory protein similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 176.0
  • Bit_score: 251
  • Evalue 1.80e-64

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
TTGGACGACTCCCGCGGCATGCCTAAAATCAAACGTACTCCGGAAGAGCAACAAGCCAGACGCGAAGGGCCAGAGTTCATCGAGAGCCTGGACCGAGGGTTACGCGTCATCCAGTCGTTTGGTGCGCATCATCGCCCAATGACGCTCAGCGATATCGCCAAGGCGTGCGACTTGCCTCGCGCAACTGCCCGACGGATATTGATGACGCTACAAAAATCAGGTTTCGTCGTCGGTGACGAAAGGCTCTTTTCTCTTACCCCACGCATTCTCACTTTAGCGGCTGCCTACCTCAGTTCCAATCAAATCAGCACAATCATGCAGCCGCTGATGGACGACGTTTCCGCCCAGGCCAAGGAAGTTTGTTCGCTCGCTGTCCTTGATGGCAGCGAAGTCGTGTTCATCGCTCGAGCAAGCCCGACGCGAGTATTCTCGACAGGCATCGATATCGGCTATCGGCTTCCAGCTTTCTGCACATCGGTCGGTCGCGTATTGCTAGGAAGGCTCTCCAATGACGAGCTTGCAGCGGCCATCGCGGGCATGGACCTGAAAATGCTC
PROTEIN sequence
Length: 185
LDDSRGMPKIKRTPEEQQARREGPEFIESLDRGLRVIQSFGAHHRPMTLSDIAKACDLPRATARRILMTLQKSGFVVGDERLFSLTPRILTLAAAYLSSNQISTIMQPLMDDVSAQAKEVCSLAVLDGSEVVFIARASPTRVFSTGIDIGYRLPAFCTSVGRVLLGRLSNDELAAAIAGMDLKML