ggKbase home page

SCNpilot_expt_500_p_scaffold_37244_2

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: comp(664..1458)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13D22_RHOPS similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 265.0
  • Bit_score: 399
  • Evalue 2.50e-108
  • rbh
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 265.0
  • Bit_score: 399
  • Evalue 7.80e-109
  • rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ABE38017.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 265.0
  • Bit_score: 399
  • Evalue 3.50e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
GCCGCTGTGCTGGTGCAGCCGATGGACGACAAGAAGAAGTGGGTGTTCAAGGTGGTGCCGAACGACGACATCATGGCAACCGCGATCCTCAAGTACATCGCCAAGAGCAGTGCCAAGAAACTCGGCTACATCGGATTTTCGGACGGGTACGGTGAGGGCTACTACAACGTGCTGAAAGCGGAGGCGCCGAAGGCCGGCATCGAACTCACCACGCATGAAGTCTATGCGCGCAGCGACGCCAGCGTCACCGGCCAGATTTTGAAGATCATCGCCACCAAGCCTGACGCGGTGTTCATCGCTGCGGCCGGCACGCCCGCGGTGCTGCCGCAGAAGGCGCTGCGCGAACGCGGCTACAAGGGCCCGATCTACCAGACCCACGGTGTCGCCACCAACGAATTCATACGCCTCGGCGGCAAGGATGTCGAAGGCGCGATCTACACCGGCGAAGCCTTCACCATCGTCGATGACCTGCCGAAGGACAGCCCGTTCCGCGCGGCCCCGGAGAAGTACATCGCCGCCTACAAGGCCATCCACAAGGAAGAGCCGGCGGCGTTCGGCGCACATCTGTGGGACTCGATCGTGCTGGTGGAAAATGCGATGCCGGCCGCTCTCAAGGCTGGTAAGCCGGGCTCGGCTGAATTCCGTGCCGCGCTCCGCGATGCACTGGAGAACGGCAAGCAGATTTATCTCAACAACGGCTTGTCGAACATGAGCCCGACCGATCACAACGGCTATGACGAACGTTCCGCGTTCCTCATCAAGGTCGAAGGTGGCAAATTCCGGCTCGCCAAGTAA
PROTEIN sequence
Length: 265
AAVLVQPMDDKKKWVFKVVPNDDIMATAILKYIAKSSAKKLGYIGFSDGYGEGYYNVLKAEAPKAGIELTTHEVYARSDASVTGQILKIIATKPDAVFIAAAGTPAVLPQKALRERGYKGPIYQTHGVATNEFIRLGGKDVEGAIYTGEAFTIVDDLPKDSPFRAAPEKYIAAYKAIHKEEPAAFGAHLWDSIVLVENAMPAALKAGKPGSAEFRAALRDALENGKQIYLNNGLSNMSPTDHNGYDERSAFLIKVEGGKFRLAK*