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SCNpilot_expt_500_p_scaffold_38406_1

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: 1..1416

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Afipia birgiae RepID=UPI0002F66C16 similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 471.0
  • Bit_score: 802
  • Evalue 1.70e-229
Transcription accessory protein {ECO:0000313|EMBL:KIZ39463.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 472.0
  • Bit_score: 803
  • Evalue 1.90e-229
RNA binding S1; K06959 uncharacterized protein similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 474.0
  • Bit_score: 799
  • Evalue 6.00e-229

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1416
AAGATACACCAAAAAATTGCAACTGAACTCGGCGTACGCGAGCAGCAGGTCGACGCGACCGTAGCCTTGCTCGATGGCGGCGCGACCGTGCCGTTCGTGGCGCGCTATCGCAAGGAAGTCACCGGCGGCCTGGACGACGCACAGTTGCGCACGCTGGAAGAGCGCCTGTCGTATTTGCGCGAACTCGAGGATCGACGCACTGCGATTCTTAATTCAGTGCGGGAACAAGGCAAGCTCGATGCCACTCTGGAAGCTGCAATTCTCGCGGCCGACAGCAAGGGCCGCCTTGAGGATATCTATCTGCCCTTCAAACCGAAACGCCGCACCAAGGCCGAAGTCGCACGTGAAGCTGGCCTCGAACCACTGGCCGAACTGCTGCTGACGAGTCCGGACAACGATCCACAGGTTGCGGCAGCCGCGTTTGTCGATGCCGAGAGGCAGGTCGCCGACGCTGCCGCCGCACTGGATGGCGCGCGCGCCATCCTGGTCGAACGCTTCGCCGAGGACGCGGACTTGATCGGCGCGCTGCGCGAGCAGATGTGGTCGGGCGGCGTGCTGATCGCGAAGCTGCGCGACGGGAAGAAAGAAGCTGGAGCAAAGTTCAGCGACTATTTCGATTTCAGCGAGCCTTTGCACAAACTGCCATCGCACCGCATCCTCGCGATGTTCCGCGGCGAGAAGGAGGAAATTCTCGACCTGCAAATTCAGCCCGAAGCCGAGGCTGGACCGGCGACAGCTCCCAATTCCTATGAATTGGGAATCATGAAACGGTTTGCCATTGCCGACCACGGCCGCCCTGGCGATCGCTGGCTCATCGACACCGTGCGGTGGGCCTGGCGCACCAAGATCCAGGTGCATCTCAATATCGATTTGCGCATGCGGTTATGGAGCGCGGCCGAGCAGGAGGCGATCCGCGTCTTTGCATCCAACCTGCGTGACCTGTTGCTTGCCGCACCCGCCGGCGCCCGTGCAACGATGGGACTCGATCCGGGATACCGTACCGGCGTCAAGGTTGCAGTGGTGGATGCCACCGGTAAGGTGGTTGCCACCACCGCTATATTCCCACATGAGCCGCAGCGGCGCTGGGATGATGCAAAGCTGGCTCTCGCCAAGCTTGCACGCGAACATCGCGTCGAACTGATCGCCATCGGCAACGGCACGGCATCGCGCGAGACCGACAAGCTGGCCACCGAACTGGTGCAGTCGTTACCCGAACTCAAGATGACCAAGATCGTGGTCTCGGAGGCGGGCGCTTCGGTTTACTCCGCCTCGGCCTTCGCTTCGGAAGAATTGCCCGGCCTGGACGTCACCTTGCGCGGCGCGGTGTCGATTGCCCGCCGCCTGCAAGATCCGCTCGCCGAACTGGTGAAGATCGAACCGAAGTCGATCGGCGTCGGCCAATATCAACACGATCTC
PROTEIN sequence
Length: 472
KIHQKIATELGVREQQVDATVALLDGGATVPFVARYRKEVTGGLDDAQLRTLEERLSYLRELEDRRTAILNSVREQGKLDATLEAAILAADSKGRLEDIYLPFKPKRRTKAEVAREAGLEPLAELLLTSPDNDPQVAAAAFVDAERQVADAAAALDGARAILVERFAEDADLIGALREQMWSGGVLIAKLRDGKKEAGAKFSDYFDFSEPLHKLPSHRILAMFRGEKEEILDLQIQPEAEAGPATAPNSYELGIMKRFAIADHGRPGDRWLIDTVRWAWRTKIQVHLNIDLRMRLWSAAEQEAIRVFASNLRDLLLAAPAGARATMGLDPGYRTGVKVAVVDATGKVVATTAIFPHEPQRRWDDAKLALAKLAREHRVELIAIGNGTASRETDKLATELVQSLPELKMTKIVVSEAGASVYSASAFASEELPGLDVTLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDL