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SCNpilot_expt_500_p_scaffold_46572_2

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: 824..1195

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease family protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I4V3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 124.0
  • Bit_score: 195
  • Evalue 3.30e-47
Tetracycline resistance protein {ECO:0000313|EMBL:EJZ32267.1}; Flags: Fragment;; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 124.0
  • Bit_score: 196
  • Evalue 2.70e-47
tetracycline resistance protein; K08151 MFS transporter, DHA1 family, tetracycline resistance protein similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 124.0
  • Bit_score: 195
  • Evalue 1.00e-47

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Taxonomy

Bradyrhizobium sp. CCGE-LA001 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGAGCGATCAGTCGCCGGAGGCCAGCGTGACGCCAAGCCAGCCGGTCGGCGCATCGCGCAATGCGGCGGTGGCTTTCATCTTCGTCACTATCCTGCTCGATATGCTGGCGCTCGGCATGATTATGCCGATCCTGCCCAAGCTGGTGGAAAGCTTCGTCGACAACGACACCGCAACGGCGGCGCGTATCTTCGGCGTGTTCGGCACTGCGTGGGCGCTGATGCAGTTCATCTTCTCGCCGGTGCTTGGCAGCCTGTCGGATCGCTTCGGCCGCCGCCCGGTGGTGCTGCTGTCGAATTTCGGTCTTGCGCTCGATTACGTTCTGATGGCACTCGCGCCCTCGCTGTGGTGGCTGTTCGTCGGTCGCGTGATT
PROTEIN sequence
Length: 124
MSDQSPEASVTPSQPVGASRNAAVAFIFVTILLDMLALGMIMPILPKLVESFVDNDTATAARIFGVFGTAWALMQFIFSPVLGSLSDRFGRRPVVLLSNFGLALDYVLMALAPSLWWLFVGRVI