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SCNpilot_expt_500_p_scaffold_50682_1

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: 1..456

Top 3 Functional Annotations

Value Algorithm Source
Biopolymer transport protein ExbD/TolR n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q134D3_RHOPS similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 139.0
  • Bit_score: 239
  • Evalue 2.50e-60
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 139.0
  • Bit_score: 239
  • Evalue 7.80e-61
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ABE40556.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 139.0
  • Bit_score: 239
  • Evalue 3.50e-60

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
TCTGACGGACACGACGACGATGATTTCGATGAGACCCACGAAATCAACGTAACGCCGTTCATCGACGTCATTCTGGTGTTGTTGATCATCTTCATGGTCGCTGCGCCACTATCGACCGTGGATTTGCCCGTCAGCTTGCCGTCGTCGACTGCGACACCGCAAAAGAAGCCGGATCAGCCGACTTATGTCAGCATCAAGTCCGATCTCGCTGTGGCCATTGGTGAAAACATGGTGAAGCGCGTCGATCGGGTGCGCTCGCTCGATGCGATGCCCGATTCAAGCAAGGACCGGTTCATATTCCTGCGGGCCGATCGCGCGGTGCCTTACGGCGAAATGATGGACGTGCTGGAGATATTGCGCGCCGGCGGTTACGCGAAAATCAAGCTCGTCGCGCTGGAAGGCGTGCCGGAGGGGGCTCCAGCCGCATCGTCTGCGACCGGACCATCGAAGCCCTGA
PROTEIN sequence
Length: 152
SDGHDDDDFDETHEINVTPFIDVILVLLIIFMVAAPLSTVDLPVSLPSSTATPQKKPDQPTYVSIKSDLAVAIGENMVKRVDRVRSLDAMPDSSKDRFIFLRADRAVPYGEMMDVLEILRAGGYAKIKLVALEGVPEGAPAASSATGPSKP*