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SCNpilot_expt_500_p_scaffold_49457_1

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: 3..311

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM33_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 102.0
  • Bit_score: 158
  • Evalue 4.90e-36
fixJ; response regulator FixJ; K14987 two-component system, LuxR family, response regulator FixJ similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 102.0
  • Bit_score: 158
  • Evalue 1.50e-36
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABE62714.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 102.0
  • Bit_score: 158
  • Evalue 6.90e-36

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
GAAAAGCCGTTTGAAGATGAGCGGTTGATCGAGACCATCGAAGCCGCATTCCGCCAGTGCCAAGATCCCTTGAAGAACGACGCGACTGCAATCGACATTGCATCCAGGGTGGCAAGCCTCAGTCAACGCGAACGCCAAGTCCTGGACGGTCTCGTCGCCGGGCTATCCAACAAACAGATCGCTCGCGAGTACAATATCAGCCCCCGGACCATCGAGGTCTACCGGGCGAACGTCATGACTAAAATGCAAGCGCATAATCTGTCAGAATTGATTCGGATGGCGCTGCGTGCCGGCATTTTGAACGATTGA
PROTEIN sequence
Length: 103
EKPFEDERLIETIEAAFRQCQDPLKNDATAIDIASRVASLSQRERQVLDGLVAGLSNKQIAREYNISPRTIEVYRANVMTKMQAHNLSELIRMALRAGILND*