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SCNpilot_expt_500_p_scaffold_49963_1

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: comp(3..539)

Top 3 Functional Annotations

Value Algorithm Source
diguanylate cyclase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000374E278 similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 179.0
  • Bit_score: 321
  • Evalue 4.50e-85
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 179.0
  • Bit_score: 319
  • Evalue 6.90e-85
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ABJ04627.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 179.0
  • Bit_score: 319
  • Evalue 3.10e-84

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
TTGCGCTTCATCAAGTTGCTTGCGCCGCTTGCGCTGAGCCTTGCGCTGCTTGCCTCGACGTTGCCGGCCCGCGCCGTCGACGCGGTCAGTGTCCGCACCGATGCGCCCGCGATCGACCTGACCGCTGTGCTCGACCATCAACAGAGCGAGACCGACCGCATTCAGGTTTCCACCGCGCCCGGCACTGACGGCATCGTGCGCCGCATTGAAGTGCGCGCGCGCGAAGGCGGACAGAACTGGGTGGTGTTCGCGCTCGCCAACAACACCGACGACCAGCTCGACCGCCTGATCGTGGCGCCGCATTATCGCATCGTCTCGTCCGGCCTGCTGTGGCCGGATCTCGGCCTGTCGCGCATCGCGACCATCACGCCCTCTTCCGGCGACCGCCCCGAGCGACAGGAAAGCCCGACCGCCGACATCTTCCGCGTCACCCTCGACCCCGGCGCGGTGATTACCTTCGTCGCCGAGCTGCGCACCGACAAGCTGCCGCAGCTCTATCTGTGGGAGCCCGATGCCTACAAGGACAAGGTCAATTCG
PROTEIN sequence
Length: 179
LRFIKLLAPLALSLALLASTLPARAVDAVSVRTDAPAIDLTAVLDHQQSETDRIQVSTAPGTDGIVRRIEVRAREGGQNWVVFALANNTDDQLDRLIVAPHYRIVSSGLLWPDLGLSRIATITPSSGDRPERQESPTADIFRVTLDPGAVITFVAELRTDKLPQLYLWEPDAYKDKVNS