ggKbase home page

SCNpilot_expt_500_p_scaffold_55834_1

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: 3..407

Top 3 Functional Annotations

Value Algorithm Source
rph; ribonuclease PH; K00989 ribonuclease PH [EC:2.7.7.56] similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 134.0
  • Bit_score: 245
  • Evalue 9.60e-63
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 134.0
  • Bit_score: 245
  • Evalue 3.30e-62
Ribonuclease PH n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=RNPH_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 134.0
  • Bit_score: 245
  • Evalue 3.10e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
CTGGGCGAACGCCAGATCACAGTGGATTGCGACGTGCTGCAGGCCGATGGCGGAACCCGCACCGCCTCGATCACCGGCGCCTGGGTGGCGCTGGCGGATTGCATCGACTGGATGAAGAACCGCAACATGTTCAAGAATGGCGGCGGCAACGTGTTGCGCGATAACGTGGCGGCGATCTCCTGCGGCATCTACAACGGCACGCCGGTGCTCGACCTCGATTATGCCGAAGACTCCACGGCCGAAACCGACGCCAACTTCGTCATGACCGGCGATGGCCGCATCATCGAGGTGCAGGGCACCGCCGAGAAGACGCCCTTCTCTCAGGACGAATTCCTGGCGCTGATGGCACTCGCCCGCAAAGGCGTGGCGCGACTGGTCGATCTGCAAAAAATGGCCGTGGCGTAG
PROTEIN sequence
Length: 135
LGERQITVDCDVLQADGGTRTASITGAWVALADCIDWMKNRNMFKNGGGNVLRDNVAAISCGIYNGTPVLDLDYAEDSTAETDANFVMTGDGRIIEVQGTAEKTPFSQDEFLALMALARKGVARLVDLQKMAVA*