ggKbase home page

SCNpilot_expt_500_p_scaffold_56007_3

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: comp(709..1020)

Top 3 Functional Annotations

Value Algorithm Source
isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 96.1
  • Coverage: 103.0
  • Bit_score: 208
  • Evalue 7.70e-52
3-isopropylmalate dehydratase large subunit {ECO:0000255|HAMAP-Rule:MF_01026}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01026};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01026}; Short=IPMI {ECO:0000255|HAMAP-Rule:MF_01026};; Isopropylmalate isomerase {ECO:0000255|HAMAP-Rule:MF_01026}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 103.0
  • Bit_score: 208
  • Evalue 3.40e-51
3-isopropylmalate dehydratase large subunit n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=LEUC_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 103.0
  • Bit_score: 208
  • Evalue 2.40e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
GGCAAGACTGTCAACGGCAACGTCAACGCCATGATCGTGCCGGGCTCGGGCCTCGTGAAGGAGCAGGCGGAAGCCGAAGGTCTCGACAAGATCTTCATCAAGGCTGGCTTCGAATGGCGCGAACCGGGCTGCTCGATGTGCCTGGCGATGAACCCCGACAAGCTGAAGCCGGAAGAGCGCTGCGCCTCGACATCGAACCGCAACTTCGAAGGCCGCCAGGGCTTCAAGGGCCGCACGCATCTGGTCTCGCCGGCGATGGCGGCGGCGGCGGCGATTGCTGGCCATTTCGTCGATATCCGCGACTGGCACTAA
PROTEIN sequence
Length: 104
GKTVNGNVNAMIVPGSGLVKEQAEAEGLDKIFIKAGFEWREPGCSMCLAMNPDKLKPEERCASTSNRNFEGRQGFKGRTHLVSPAMAAAAAIAGHFVDIRDWH*