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SCNpilot_expt_500_p_scaffold_28695_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 7 / 55 BSCG 6 / 51 ASCG 1 / 38
Location: comp(1..270)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PII2_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 88.0
  • Bit_score: 126
  • Evalue 1.80e-26
winged helix family two component transcriptional regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 88.0
  • Bit_score: 126
  • Evalue 5.70e-27
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACU58171.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 88.0
  • Bit_score: 126
  • Evalue 2.50e-26

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 270
ATGGAAAAATCTATTAACCAGGGATATATATTATTGGTAGAAGACGAAGAAAATCTTCAGGAAGCATTAAAGCTGAACCTGGAACTGGAAGGGTATGAAGTAACCAGTGCAGGCGATGGCGCCGAAGCGCTCAAAAGGATCAATGAAGAATATTTCGACCTGATCATTCTTGATGTGATGCTTCCCGAAATTGACGGCATCGGTGTAGCCGAAAATGTCAGGCTGAAGAATAATGATGTTCCTATTTTAATGGTAAGCGCCAAAAGCAGC
PROTEIN sequence
Length: 90
MEKSINQGYILLVEDEENLQEALKLNLELEGYEVTSAGDGAEALKRINEEYFDLIILDVMLPEIDGIGVAENVRLKNNDVPILMVSAKSS