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SCNpilot_expt_500_p_scaffold_36358_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 7 / 55 BSCG 6 / 51 ASCG 1 / 38
Location: comp(2..1021)

Top 3 Functional Annotations

Value Algorithm Source
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9EEB7_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 326.0
  • Bit_score: 258
  • Evalue 8.80e-66
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAO42725.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.8
  • Coverage: 353.0
  • Bit_score: 258
  • Evalue 1.20e-65
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 337.0
  • Bit_score: 233
  • Evalue 9.50e-59

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1020
ATGAAATTAAAAGCCGAATTGATGGTGCCACCCGGTGTGGGACCACTACTTTCCAAAACTTTACTGATTATGAAACTTACGGTTGTTGTATTGATCGCTGCCTGCCTGCAGCTTCATGCCGAAGGTTACGCACAAAAGCTGACAGTAAATGAAAAAAATGTGCCTGTTCAAAAAATTTTCAAGATCATTGAGCAGCATACTTCCTATCATTTTTTTTACAAAGATGAGCTCCTGCGGGATATGGGAACGGTAAGCGTAGATGCGAAAAATGCAACTGTTGAAACATTGCTTGACGTATGCTTCAACCAGTCTCCGTTAACCTATTCCATCGTAGAAAAAACCATTATTATCAAAAAGAAGGGAGAACAGTTATCCGACGGGGAGAATACTACAATTCCCCTCGCGGAAATCAAAGGGCAGATCAAAGACAACGAAGGCAACCCGGTTCCCGGAGCCTCAGTAAAAAACCGCCGCACAGGCAAAGGCGTTGCCACCGATGCAGAAGGGAACTTTTCTATTGAGGCGGCAGTAAATGATCTTATTGAGATCAGCTCGATAGGATTCGAATCCCAGACTGTTAAGATCACCTCCCTGCAACAGGTGATAAATATTTCACTGAAAATAGCCGCTTCCGAATTAGAGAATACCGTTATTGTAGGTTACGGCAGCCAGAAGAAGAAAACGCTTACAGGCGCTGTGTCCTCTATCAGCGGATCGGCCATGGTCACTACCAAAAACGAGAACCCGCAAAACATGCTGACAGGGAAAATTGCCGGTGTAAGAGTAGCGCAAAAGACGGCAGAGCCGGGAGCATTCAATAACGCATTTGATATCCGTGGCTTTGGCTCCCCGCTTATCGTTATTGACGGCATACCCCGTTCCATGGCAGACTTCCAGCGCCTGAACGCCAATGATATTGATAATATATCCGTTTTGAAAGATGCCTCTGCCGCCATTTATGGAGTACGCTCTGCAAACGGTGTAGTGCTGATCACTACTAAAAAAGGAAAGAACAATGAG
PROTEIN sequence
Length: 340
MKLKAELMVPPGVGPLLSKTLLIMKLTVVVLIAACLQLHAEGYAQKLTVNEKNVPVQKIFKIIEQHTSYHFFYKDELLRDMGTVSVDAKNATVETLLDVCFNQSPLTYSIVEKTIIIKKKGEQLSDGENTTIPLAEIKGQIKDNEGNPVPGASVKNRRTGKGVATDAEGNFSIEAAVNDLIEISSIGFESQTVKITSLQQVINISLKIAASELENTVIVGYGSQKKKTLTGAVSSISGSAMVTTKNENPQNMLTGKIAGVRVAQKTAEPGAFNNAFDIRGFGSPLIVIDGIPRSMADFQRLNANDIDNISVLKDASAAIYGVRSANGVVLITTKKGKNNE