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SCNpilot_expt_500_p_scaffold_46847_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 7 / 55 BSCG 6 / 51 ASCG 1 / 38
Location: comp(2..160)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase, large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 52.0
  • Bit_score: 96
  • Evalue 2.20e-18
3-isopropylmalate dehydratase large subunit {ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.- {ECO:0000256|SAAS:SAAS00274346};; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00091399};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 52.0
  • Bit_score: 96
  • Evalue 9.70e-18
3-isopropylmalate dehydratase large subunit n=1 Tax=Segetibacter koreensis RepID=UPI000381566D similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 52.0
  • Bit_score: 98
  • Evalue 1.80e-18

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 159
ATGAGTAGTAAGCCAACAACCTTGTTTGACAAAGTTTGGGATGCCCATACCGTAAGGAGTATTCCTGATGGGCCGGATGTTTTGTTTATTGACCGTCATTTTATTCACGAAGTGACCAGCCCGGTAGCATTCCTCGGCATTGAAAACCGCGGTATCCCG
PROTEIN sequence
Length: 53
MSSKPTTLFDKVWDAHTVRSIPDGPDVLFIDRHFIHEVTSPVAFLGIENRGIP