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SCNpilot_expt_500_p_scaffold_54447_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 7 / 55 BSCG 6 / 51 ASCG 1 / 38
Location: comp(2..577)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000374B797 similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 160.0
  • Bit_score: 157
  • Evalue 1.60e-35
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 161.0
  • Bit_score: 157
  • Evalue 4.90e-36
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU64143.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 161.0
  • Bit_score: 157
  • Evalue 2.20e-35

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 576
ATGGTATTGCTTTTTACTCCAAATACTTTATGTCCTTCCTTTTTATTATTTTTATTTTTCAAAACTAACACTGCATTGCCCGGAAAGGATACATACGATGATGCCCTGCTAATTCAGGAATTGCGGCAAAATAATGCTGAAGCATTTATAGAGCTATATAACAGGTATCATGTACAGATGTATAGCTGGCTGATCCGCTTTGTTAAACTTCCCGAGTTTGCTGAAGATATTATCCAGGAAACTTTTTTAAAGATCTGGGAGATCAGGCATCGTCTCAATCCCGCGCAATCTTTTCCTGCCTACCTGTATCGGATAAGCCGTAATAAAGCCTTTAAATCATTGAAGAAAATTTCACTGGATGAAACGCTCAGGAAACAGGTATTGATCCAGTTTGAAATAGAGTCGGATGATCCCGAAAAAAGATTACGATGGTTGCAATACCAGCAGTTGCTCGAAAATGCAGTCAACCGGCTGCCCGCACAACGGCAAAAAGTATTCAAGCTGTGCAGGCAAAACAATAAGACCTACGACGAAGTGGCAAATGAGCTGGGCATTTCCCGTAATACCGTAAAAGAG
PROTEIN sequence
Length: 192
MVLLFTPNTLCPSFLLFLFFKTNTALPGKDTYDDALLIQELRQNNAEAFIELYNRYHVQMYSWLIRFVKLPEFAEDIIQETFLKIWEIRHRLNPAQSFPAYLYRISRNKAFKSLKKISLDETLRKQVLIQFEIESDDPEKRLRWLQYQQLLENAVNRLPAQRQKVFKLCRQNNKTYDEVANELGISRNTVKE