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SCNpilot_expt_500_p_scaffold_28162_3

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

partial RP 7 / 55 BSCG 9 / 51 MC: 1 ASCG 3 / 38
Location: 1707..1883

Top 3 Functional Annotations

Value Algorithm Source
High-affinity choline transporter n=1 Tax=Myroides odoratimimus CCUG 12700 RepID=S3XM79_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 58.0
  • Bit_score: 87
  • Evalue 4.70e-15
Choline/carnitine/betaine transporter {ECO:0000313|EMBL:EOR29704.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 58.0
  • Bit_score: 80
  • Evalue 1.00e-12
choline/carnitine/betaine transporter; K02168 high-affinity choline transport protein similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 55.0
  • Bit_score: 67
  • Evalue 2.00e-09

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Taxonomy

Elizabethkingia meningoseptica → Elizabethkingia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 177
ATGATGAAAAAATTACCAAAAATCAGAACGACATTAAATAAAGGAGTGGTAATACCGAGTTTGGTTTTCATCATCGGTATTTGCCTTTTGGCCGGAATTTTTCCAAATCTTATGGGTGAACTGCTCCAGAAAGTGAAAGATTTTATTTTCGTAAATCTCAATTACATCTACATTTGG
PROTEIN sequence
Length: 59
MMKKLPKIRTTLNKGVVIPSLVFIIGICLLAGIFPNLMGELLQKVKDFIFVNLNYIYIW