ggKbase home page

SCNpilot_expt_500_p_scaffold_40932_3

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

partial RP 7 / 55 BSCG 9 / 51 MC: 1 ASCG 3 / 38
Location: 927..1337

Top 3 Functional Annotations

Value Algorithm Source
Heavy metal efflux pump, CzcA family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W186_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 137.0
  • Bit_score: 247
  • Evalue 1.10e-62
CzcA family cobalt/zinc/cadmium efflux RND transporter {ECO:0000313|EMBL:CDS98000.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 137.0
  • Bit_score: 264
  • Evalue 9.10e-68
CzcA family heavy metal efflux protein similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 137.0
  • Bit_score: 240
  • Evalue 2.40e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobacterium sp. PM2-P1-29 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 411
ATGCTTACGAAAATTATCGAGTTTTCTGTAAAGAATAAACTCATTATAGCATTACTGGTTCTTGGTTTAATAGGCATTGGCTCTTATCAGGTATCCAAATTACCGATAGATGCCGTACCGGATATTACCAACAATCAGGTGCAGGTTATTACGATTGCTCCGTCATTTGGAGCAACCGATATAGAACGGCTGGTCACGTTTCCTATTGAGCAGGCCAACTCCAACATTGCCGGACTTAAAGAAATCCGCAGTTTTTCACGTTTCGGATTGTCGCTGGTGACCATTGTTTTTGATGATGGTATTGATGTGTACTGGGCGCGACAACAGGTGGCAGAGCGATTGCAGCAGGTTCAGAATGAAATTCCACAAGGAATCGGGACGCCTCAACTGGGGCCTATTTCCACCGGGCTT
PROTEIN sequence
Length: 137
MLTKIIEFSVKNKLIIALLVLGLIGIGSYQVSKLPIDAVPDITNNQVQVITIAPSFGATDIERLVTFPIEQANSNIAGLKEIRSFSRFGLSLVTIVFDDGIDVYWARQQVAERLQQVQNEIPQGIGTPQLGPISTGL