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SCNpilot_expt_500_p_scaffold_41320_3

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

partial RP 7 / 55 BSCG 9 / 51 MC: 1 ASCG 3 / 38
Location: comp(952..1326)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VUP5_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 124.0
  • Bit_score: 222
  • Evalue 3.40e-55
RNA polymerase sigma factor {ECO:0000313|EMBL:KFF27572.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 124.0
  • Bit_score: 225
  • Evalue 4.30e-56
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 124.0
  • Bit_score: 210
  • Evalue 3.20e-52

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Taxonomy

Chryseobacterium piperi → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 375
CAGAACTTTCATCAGTTTAAGCAGGACAGCCAGTTGTACACATGGCTTTACCGCATTGCCACCAACGAGGCACTGCAACAGCTCAACAAGATGAAACGAATGCAGAAGAGCGATGATGATGCTGAATATCAGCTGCAGAATCTGGTTGCTGAGAATGCAGAATCTGATGCTGAAGAAATTCAACTGCTTTTGCAAAATGCGATACAAACACTTCCCGAAAAGCAAAAACTGGTTTTCACCATGCGGTATTATGATGATTTGCCCTACGATGAAATTTCGAAAATTCTCGATATGTCTGTGGGCACGCTGAAGACCAATTATCATTATGCCAAACAAAAAGTGGAAGATTATGTTAAAAACAATTACGAATCATAA
PROTEIN sequence
Length: 125
QNFHQFKQDSQLYTWLYRIATNEALQQLNKMKRMQKSDDDAEYQLQNLVAENAESDAEEIQLLLQNAIQTLPEKQKLVFTMRYYDDLPYDEISKILDMSVGTLKTNYHYAKQKVEDYVKNNYES*