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SCNpilot_expt_500_p_scaffold_42687_1

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

partial RP 7 / 55 BSCG 9 / 51 MC: 1 ASCG 3 / 38
Location: 2..205

Top 3 Functional Annotations

Value Algorithm Source
RND transporter, HAE1 family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VY53_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 67.0
  • Bit_score: 121
  • Evalue 2.60e-25
Multidrug transporter AcrB {ECO:0000313|EMBL:KFC22172.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 67.0
  • Bit_score: 122
  • Evalue 2.10e-25
multidrug efflux transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 55.0
  • Bit_score: 85
  • Evalue 8.40e-15

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Taxonomy

Epilithonimonas lactis → Epilithonimonas → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 204
GGCGCCATCGGTAACCGAACTATCGGTACAGCCGCATCTGGCGGGATGCTGATCGGAACTGTTTTCGGCCTGTTCATTATCCCTGGTCTTTATTATGTTTTTGCCACTTTTGCTGCTAAAAACAGATTGGCTCATTATGAAGAAGAATATCCATTAACCGAACAAACTGAACCTTACCAACATGATGGAAAATTTGAAGATTAA
PROTEIN sequence
Length: 68
GAIGNRTIGTAASGGMLIGTVFGLFIIPGLYYVFATFAAKNRLAHYEEEYPLTEQTEPYQHDGKFED*