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SCNpilot_expt_500_p_scaffold_47743_3

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

partial RP 7 / 55 BSCG 9 / 51 MC: 1 ASCG 3 / 38
Location: 870..1169

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 98.0
  • Bit_score: 127
  • Evalue 1.30e-26
Transcription termination factor Rho n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVL3_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 98.0
  • Bit_score: 116
  • Evalue 1.60e-23
transcription termination factor similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 105.0
  • Bit_score: 92
  • Evalue 7.70e-17

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Taxonomy

Chryseobacterium antarcticum → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 300
ATGTTCAATATCGAAACGTTAAGGTCGAAATCTCCCGAAGATTTGACTAAAATTACGAAAGATTTAGGCGTTAAACTTGTTAGAAATAGCTCCGACAACGATAAAATCTTTGCCATCCTCGATTTTCAAGCATCGAACACGCAAGCCGCAAAAGATTATTTCAACGCTACAGAAATCTCCGTGAATTCAGAACAAAAGTCCACTTCCGACCAACCGGCTCCCACACCCAAAAAGCGTGGCCCCAAAAAGAAAACACCAGCACCTGTAGAAAGTTCAGGGGAAATTCCTGCGGAAACAACG
PROTEIN sequence
Length: 100
MFNIETLRSKSPEDLTKITKDLGVKLVRNSSDNDKIFAILDFQASNTQAAKDYFNATEISVNSEQKSTSDQPAPTPKKRGPKKKTPAPVESSGEIPAETT