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SCNpilot_expt_500_p_scaffold_52446_1

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

partial RP 7 / 55 BSCG 9 / 51 MC: 1 ASCG 3 / 38
Location: 3..1079

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=421525 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium haifense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 359.0
  • Bit_score: 683
  • Evalue 1.60e-193
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 93.6
  • Coverage: 359.0
  • Bit_score: 675
  • Evalue 7.70e-192
DNA-directed RNA polymerase subunit beta n=1 Tax=Chryseobacterium haifense RepID=J9ZVS7_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 359.0
  • Bit_score: 683
  • Evalue 1.20e-193

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Taxonomy

Chryseobacterium haifense → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1077
TGTCCGATTGAAACGCCTGAAGGACCAAACATTGGTTTGATCTCCTCACTGGGAATTTATGCTAAAATCAATAATTTAGGATTCATCGAGACTCCTTATAGAAAAGTAGCCAACGGTAAAGTTGACCTTAAAAATCCTGCAATCTTCCTTAATGCTGAAGATGAAGAAGATAAGGTTATTGCACAGGCAAACGTTGAAATGACTGATGACGGAACCATCTCTACTGAAAGAGTTATTGCCCGACTAGATGGTGATTACCCAGTAGTGGAACCTAATGAAGTTAATTTGATTGACGTAGCACCTAACCAGATTTCTGGTATTTCGGCGTCATTAATTCCGTTCTTGGAGCATGATGATGCGAACCGTGCCTTGATGGGATCCAACATGATGCGTCAAGCGGTGCCGTTATTGAAGCCACAAGCTCCAATTGTGGGTACAGGTTTAGAGAAACAGGTTGCAACCGACTCCAGAGTATTGATTAACGCTGAAGGAAATGGAGTTGTAGAGTATGTAGATGCTGACAAAATCACCATTAAATACGAAAGAAGCGAAGACGATGATTTAGTATCATTCGAATCTGCGACCAAAAGTTATAAATTAACCAAATTCAGAAAAACCAACCAAAGTACAACCATTACTTTAAGACCAAACGTAAGGGTGGGCGACAAAGTAACCAAAGGACAAGTGCTTTGCGATGGATATGCAACAGAAAATGGTGAGCTCGCTTTGGGTAGAAACCTTACCGTGGCCTTCATGCCATGGAAAGGATACAACTTTGAGGATGCCATCGTAATCAACGAAAAAGCAGTTCGCGAAGACTGGTTTACCTCCATCCATGTTGATGAATATTCTTTGGAAGTTCGGGACACCAAACTGGGTATGGAAGAACTGACCGCCGATATTCCAAACGTTTCCGAAGAAGCCACCAAAGACTTAGACGAAAACGGTATGATCCGTATCGGTGCAGAGGTGAAACCTGGTGACATCATGATTGGTAAAATTACACCAAAAGGAGAATCTGATCCTACACCGGAAGAAAAACTTCTTAGAGCGATCTTCGGTGATAAAGCTGGCGAT
PROTEIN sequence
Length: 359
CPIETPEGPNIGLISSLGIYAKINNLGFIETPYRKVANGKVDLKNPAIFLNAEDEEDKVIAQANVEMTDDGTISTERVIARLDGDYPVVEPNEVNLIDVAPNQISGISASLIPFLEHDDANRALMGSNMMRQAVPLLKPQAPIVGTGLEKQVATDSRVLINAEGNGVVEYVDADKITIKYERSEDDDLVSFESATKSYKLTKFRKTNQSTTITLRPNVRVGDKVTKGQVLCDGYATENGELALGRNLTVAFMPWKGYNFEDAIVINEKAVREDWFTSIHVDEYSLEVRDTKLGMEELTADIPNVSEEATKDLDENGMIRIGAEVKPGDIMIGKITPKGESDPTPEEKLLRAIFGDKAGD