ggKbase home page

SCNpilot_expt_500_p_scaffold_36930_1

Organism: SCNpilot_P_inoc_Planctomycetales_70_10

partial RP 3 / 55 BSCG 2 / 51 MC: 1 ASCG 1 / 38
Location: comp(1..1467)

Top 3 Functional Annotations

Value Algorithm Source
Na-Ca exchanger/integrin-beta4 n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B495_HERA2 similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 495.0
  • Bit_score: 393
  • Evalue 2.50e-106
Na-Ca exchanger/integrin-beta4 similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 495.0
  • Bit_score: 393
  • Evalue 7.90e-107
Calx-beta domain-containing protein {ECO:0000313|EMBL:AFD07408.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 497.0
  • Bit_score: 383
  • Evalue 6.20e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Solitalea canadensis → Solitalea → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1467
GCGCCGTCGGACTACGCGACGGCCTCGGGGACGATCACGTTCGCCCCGGGCGAGACCAGCAAGACGATCACGGTGCCGGTCCAGGGCGACGCGAACGTCGAGGGGGACGAGACGTTCTTCGTGAACCTCTCCAACGCGATCAACGCCGCGTTCACGAAGTCGCAGGGCCAGGCGACGATCCGCAACGACGACGCGGCGTTCTACGTCAACGACCCCTGGATCGTCGAGGGGGATTCCGGGACCAAGAACCTCCAGTTCACGGTCTACATCCCCTACGCGACCACGAAGACGGTCACGGTCAAGTACGCCACCGCGGACGGCTCCGCGACGGCGGGCTCCGACTACACGGCGGCGACCGGCACGCTCACCTTCGCCCCCGGCGAGACCAGCAAGGTCGTCGACGTGACGATCCAGGGCGACGCCACGCCCGAGCCGTCGGAGACGGTCCTCCTCAACCTCTCCGACCCGACCAACGCCGTCATCGCCGACGCCCATGGCGTGGGCACGATCTACAACGACGACACCACGGTCTCGGTGGCGGACGCGACCATCGTCGAGGGCGATTCCGGGACCTCGACGGTCCTGGTGACGGTGCAGCTCTCCGTCGCCAGCAGCAGCACCGTGACGGTGAATTACGCGACCCAGAACAACTCGGCGACGGCCGGCTCCGACTACGTCGCGGCCTCCGGGACGCTCACGTTCGGCCCCGGCGAGACCAGCAAGACGATCGCGATCGTCGTGAACGGGGACACCACCGCCGAGGCGAACGAGACCTTCTTCGTCAACCTCAGCAGCCCGACCTCGGCCCTGATCGCCGACCCCCAGGCGGTCGTGACCATCTTCAACGACGACGGCTCCCTGTCGGTGGCGGGCGTCTCCGCGCCGGAGGGGAACTCAGGCCCTCGCGCCTTCAACTTCGTCGTCTCGCTGGCCTATCCGTCGACGAAGACGGTCACCGTCGCCTATGAGACGGTCGACGGGACCGCGACGGCCGGCTCCGACTACACCGCCGTCTCGGGCGTCCTGACCTTCGCGCCGGGCGAGGTCACCAAGGTCGTGCAGGTCCAGGTGCAGGGCGACGTGCTCGTCGAGGACGACGAGACCTTCCAACTCGTCCTCTCGGACCCGACCAACGCCGCCCTCGCGGCCGGCTCGGCGACCGGCACGATCCAGAACGACGAGGCGACCCCGAGCCTCTCCATCGGGTCGGTCTCGGTCGGCGAGGGGAACTCCGGCTCCACGCCGGCCACGTTCACCGTCGTCCTGTCCACCGCCAGCGCCCACGCGGTGACGGTGAAGTACGCCACCTCGGGCGCGACGGCGACGTCGGGCGTCGACTTCACGGCCGCCTCCGGCACGCTCACCTTCGCGCCGGGGCAGACGAGCAAGACCATCACGATCGACGTCCTGGGCGACCTGCTCGACGAGGACGACGAGACGTTCAAGGTGACCCTCTCCGACCCGACC
PROTEIN sequence
Length: 489
APSDYATASGTITFAPGETSKTITVPVQGDANVEGDETFFVNLSNAINAAFTKSQGQATIRNDDAAFYVNDPWIVEGDSGTKNLQFTVYIPYATTKTVTVKYATADGSATAGSDYTAATGTLTFAPGETSKVVDVTIQGDATPEPSETVLLNLSDPTNAVIADAHGVGTIYNDDTTVSVADATIVEGDSGTSTVLVTVQLSVASSSTVTVNYATQNNSATAGSDYVAASGTLTFGPGETSKTIAIVVNGDTTAEANETFFVNLSSPTSALIADPQAVVTIFNDDGSLSVAGVSAPEGNSGPRAFNFVVSLAYPSTKTVTVAYETVDGTATAGSDYTAVSGVLTFAPGEVTKVVQVQVQGDVLVEDDETFQLVLSDPTNAALAAGSATGTIQNDEATPSLSIGSVSVGEGNSGSTPATFTVVLSTASAHAVTVKYATSGATATSGVDFTAASGTLTFAPGQTSKTITIDVLGDLLDEDDETFKVTLSDPT