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SCNpilot_expt_500_p_scaffold_45593_2

Organism: SCNpilot_P_inoc_Planctomycetales_70_10

partial RP 3 / 55 BSCG 2 / 51 MC: 1 ASCG 1 / 38
Location: comp(784..1215)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SWZ5_PLAL2 similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 135.0
  • Bit_score: 157
  • Evalue 1.20e-35
LysR family transcriptional regulator; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 135.0
  • Bit_score: 157
  • Evalue 3.70e-36
LysR substrate-binding protein {ECO:0000313|EMBL:ADG67495.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 135.0
  • Bit_score: 157
  • Evalue 1.60e-35

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 432
AAGTTCGAGACCCTGTTCCAGGAGGAGTTGCTGCTGGTCACGGCGGCCGACCACCCGCTGGCCGGCCGCGATCGGGTGGAGCTGGACGACCTCCGCGACTTCCCGTTCGTCCTGTTGGACGAGGCGCATTGCCTCTCCGACGACATCCGCGGCTTCTGCCGTCGTCGACTGTTCCAGCCCGTGACCACCGGCCGGGTGAGCCAGCTCGCGACGGTGCAAGAGCTGGTCGCGCAGGGCTTCGGCATCTCGCTCGTCCCCGCGATGGCCGTCCGACCCGATCCGTCGGGCCGGCTCCGCTATCGGTCCCTCGACGGCGAGCGCCCCTCGCGCACCATCACCGCCTGCTGGAACCCCGACCGCTACCAGTCGCGACTGATGCTCAGCTTCCTGGAGACGCTGAAACGGACGCGCATTGTTCCGTCGAAAACATAA
PROTEIN sequence
Length: 144
KFETLFQEELLLVTAADHPLAGRDRVELDDLRDFPFVLLDEAHCLSDDIRGFCRRRLFQPVTTGRVSQLATVQELVAQGFGISLVPAMAVRPDPSGRLRYRSLDGERPSRTITACWNPDRYQSRLMLSFLETLKRTRIVPSKT*