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SCNpilot_expt_500_p_scaffold_25022_2

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: comp(684..1973)

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, Fis family transcriptional regulator id=12497350 bin=THIO_MID species=Caldimonas manganoxidans genus=Caldimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 430.0
  • Bit_score: 837
  • Evalue 4.40e-240
  • rbh
two component, sigma54 specific, Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 445.0
  • Bit_score: 490
  • Evalue 7.10e-136
  • rbh
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:AEF91609.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 445.0
  • Bit_score: 490
  • Evalue 3.20e-135

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Taxonomy

Delftia sp. Cs1-4 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1290
ATGGCCCTGATCCTGCTCCTAGACGACGACGACGGCTTCCGCGCAAGCCTCGCCGAAACACTCACCGATCTCGGTCATGCCGTACGGGCCGAAGCCACGCTCGCAGGCGCGCGCGCCGCGCTGGCAGATACGCCGCAGCTGGCCCTGATCGATCTGCGCCTGGGCGCGGAAAACGGGCTCGATTTTGTCCGGCACGCGCGCACCGTGCACCCCGATCTGCCCTGCGTGGTACTCACCGCCTACGCCAGCGGCGACAACACCATCGAAGCGATGAAACTTGGCGCCTTCGATCACCTCACCAAACCCATCGGGCGCGCGCAGCTCGCCGACGTCGTCGCCGCCGCGCTCGCCCGCACACCGGCCGACGCGCTCCCCGACGACGCCGCGGCCGAGCCGGGCCTGATCGGCACCAGCCCGGCAATGCGCGAAGTGCAGAAACGCATCGGACTGGCCGCAGCCTCCGACACCACCGTGCTGATTGGCGGCGAAACCGGCACCGGCAAGGAAGTCGTCGCACGCCTGCTGCACCGTCACAGCGCGCGCGCAAACAGCCCCTTCGTCGCGGTCAACTGCGCGGCGATTCCGGCCGACCTGATCGAGAGCGAGCTCTTCGGCCATGTGCGGGGGGCGTTTTCCGGCGCGCATGCCGACCGCGCAGGGCGCTTCCGCGAGGCCGGCGGCGGAACGCTGCTGCTCGACGAGGTCGGCGACATGCCGCTCGCCCTGCAGGCCAAGCTGCTGCGCGTGCTGCAGGAGCGCGAAGTGGTGCCGGTCGGCGCCGGCCGCGCGTATCCGGTCGACGTGCGCGTGATCGCGGCCAGCCACCGCGCCCTGGCCGACGAAGCGCGCGCCGGCCGCTTCCGCGAGGACCTCTACTACCGCCTCGACGTGTTTCCCATCCATCTGCCGCCCCTGCGCGAGCGCGCCGCCGACCTGCCCACGCTCGCGGCGCATTTCCTGCGGCCCTATGGCAAGCGCCCCGCCCAGGCGGCGCTGGACCGCCTCGCCCGCCACGCCTGGCCGGGCAACGTGCGCGAGCTGCGCAACGTGCTCGAACGCGCGGCGCTCACCGCGCGCGGCAGCACGATCGGTCCCGACGATCTCGCACTCGGCGGCGGCAGTGGCGGCGACGAAGCCGTGCCCTGGGACGCCCCCCTGACCGAGGCCGTCGCCTGGCTGGAGACGCGCATGATCCGGCGCGCGCTCGACCGCGCCGGCGGCAACGTCAGCGAAGCCGCGCGCGCACTCGGCATCAGCCGCCAGCAGCTTTACCGCAAGCTCGCCGACTGA
PROTEIN sequence
Length: 430
MALILLLDDDDGFRASLAETLTDLGHAVRAEATLAGARAALADTPQLALIDLRLGAENGLDFVRHARTVHPDLPCVVLTAYASGDNTIEAMKLGAFDHLTKPIGRAQLADVVAAALARTPADALPDDAAAEPGLIGTSPAMREVQKRIGLAAASDTTVLIGGETGTGKEVVARLLHRHSARANSPFVAVNCAAIPADLIESELFGHVRGAFSGAHADRAGRFREAGGGTLLLDEVGDMPLALQAKLLRVLQEREVVPVGAGRAYPVDVRVIAASHRALADEARAGRFREDLYYRLDVFPIHLPPLRERAADLPTLAAHFLRPYGKRPAQAALDRLARHAWPGNVRELRNVLERAALTARGSTIGPDDLALGGGSGGDEAVPWDAPLTEAVAWLETRMIRRALDRAGGNVSEAARALGISRQQLYRKLAD*