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SCNpilot_expt_500_p_scaffold_25030_2

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: comp(202..1563)

Top 3 Functional Annotations

Value Algorithm Source
beta-1,4-xylanase id=12497842 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 402.0
  • Bit_score: 842
  • Evalue 1.90e-241
  • rbh
beta-1,4-xylanase similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 406.0
  • Bit_score: 361
  • Evalue 4.00e-97
  • rbh
Beta-1,4-xylanase {ECO:0000313|EMBL:AFY82267.1}; Flags: Precursor;; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 406.0
  • Bit_score: 361
  • Evalue 1.80e-96

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Taxonomy

Oscillatoria acuminata → Oscillatoria → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ATGCGTGCAGGCACTACACGGGGTGATCGCGTGAAGATCACTCAAGTTTTACAGTCAACATTTCGATCTCTTATGTGTCTTGTCTGGCCCAGGTGTCTGCTGATTTTTCTTTTCGGCTGTTCCATGGCGGGGTCGTCCCTGGTCGTGTATGGCGGAAAACCCTTGCCAGTCAAGAGCCGGGTTGACCGGGCGTATTTTGGATTCCATGCGCATCGTTTGGTGGAAAGGCATCCCGGGCCTGCCAATGGCAATCAGTTGTCTCCGTGGCCTGACCTGCCTTTCGGGTCGTGGCGACTATGGGATGCTTACGTAGCATGGCCCAATTTGCAGCCGCAGCGAGGGCGCTGGAATTTCAATACGCTCGACAAGTATGTGGATATGGCAGATGCTGCGGGCGTTGAAATTCTGCTGCCTCTCGGGTTGTCGCCTACATGGGCGTCCGCACGCCCCCAGGAGCCCTCGAGTTACAGACCCGGCAATGCCGCCGAACCTGTCAATCCGAACGACTGGCAATTGTATGTGCGCACTGTTGCCGAACGATACAAGGGCCGTATCAGGCAATACGAAATCTGGAATGAAATCAATCTCAAGGGGTTTTACTCCGGGAGTCTCGAAACCTTGCTCGATATGGCGCGTATTGCTTACCAGGAAATCAAGCAAGTGGATCCTGAGGCCATTCTGGTGTCGCCCTCAATAACAGGCGATGGCCGTAATCCGGAATGGCTCGATCGTTATCTCTCGATGGGAGGCGGGCAATATGCCGATGTGATCGGCTATCACTTTTATGTGCCGGCAAAAGCGCCCGAGGCGATGCTGCCACTGGTCGAGCGTGTGCGGGCCATCATGCGAAAGCATGGTGTGGGGGGTAAGCCGCTGTGGAATACGGAATCAGGCTGGTGGATAGAGAATCTGAACCCTGCGGCCAGACTCGGAGCTGCCCATGAAAGCTGGAAACGTCTCGATCAACAGGCTGCTGTATCTTATGTTTCGCGTGCCTTGATTCTGGGGTGGGCATCAGGCGTATCCCGTTTCTATTGGTATGCCTGGGACAATGCGGACATGGGTTTGTACGATCTATACGCTGGCGAGAATAAGCCCGCAGCGCGCGCATACGCGCGCACGGCCTCCTGGCTGATTGGCCACCGAATACTTGGGTGTGCCGGGTCGAGAGGTGTGTGGGTATGCGATTTGACCGATTCCGAAGGCCGGCCGGCGCATATCGTGTGGCGAGAACAGGATACCGTGGATTTCTGGAGTGTTCCCGCTGCATGGAAGGCAACCGTTATTGAATCGCTCGATGGCGAAAACGGCACGGTAAGCAGAAGTATCCGGCTGGGTTGGCAGCCTGTTCTGATCAGATGA
PROTEIN sequence
Length: 454
MRAGTTRGDRVKITQVLQSTFRSLMCLVWPRCLLIFLFGCSMAGSSLVVYGGKPLPVKSRVDRAYFGFHAHRLVERHPGPANGNQLSPWPDLPFGSWRLWDAYVAWPNLQPQRGRWNFNTLDKYVDMADAAGVEILLPLGLSPTWASARPQEPSSYRPGNAAEPVNPNDWQLYVRTVAERYKGRIRQYEIWNEINLKGFYSGSLETLLDMARIAYQEIKQVDPEAILVSPSITGDGRNPEWLDRYLSMGGGQYADVIGYHFYVPAKAPEAMLPLVERVRAIMRKHGVGGKPLWNTESGWWIENLNPAARLGAAHESWKRLDQQAAVSYVSRALILGWASGVSRFYWYAWDNADMGLYDLYAGENKPAARAYARTASWLIGHRILGCAGSRGVWVCDLTDSEGRPAHIVWREQDTVDFWSVPAAWKATVIESLDGENGTVSRSIRLGWQPVLIR*