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SCNpilot_expt_500_p_scaffold_31728_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: 2..1198

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein id=12497111 bin=THIO_MID species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 399.0
  • Bit_score: 763
  • Evalue 1.30e-217
  • rbh
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 393.0
  • Bit_score: 549
  • Evalue 9.20e-154
  • rbh
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 392.0
  • Bit_score: 558
  • Evalue 8.80e-156

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
GTCGGCATTCTGGCCATCCTGGTCCTTCTCGCCGGCTGGCTGTCGCGCGACAATGCCGAGCGCACGGCGCCGCGCTACAAGACCGTCGCGACGACGACGGGCACGCTCGTGGTCCATGTGTCGGCCACCGGCAACCTGCAGCCCACCAACCAGGTCGAAGTCGGCAGCGAGTTGTCCGGCATCATGGACCAGGTGTACGTTGATGAGAACGACCGCGTGAAGCGGGGCCAGATCCTGGCCCGTCTCGATTTGTCGAAACTCAAGGACGCAGTCGCGAAATCGCGCGCCAGTCTTGCCGCCGCCGATGCGCAGGTGCTGCAGGCGCAGGCCACCACGGCCGAAGCGCGCGCGACCCTCACGCGCTACCGCGAAGTCGCCCGCCTGTCCGGCGGCAAGGTGCCATCGCAGACCGAGATGGACGCTGCCGAAGCCAATCTCAAGCGCGCCGAGGCAAACGAAGCCAGCACCCGCGCCAGTGTGGTGCAGGCGCGCGCCAATCTGCAGTCGGACGAGACCAATCTGGGCAAGGCCAGCATCCGTTCGCCCATCGACGGCGTGGTCCTGTCGCGCAAGGTCGAACCGGGCCAGACCGTCGCCGCGTCTTTCCAGGCTCCGGTGCTGTTCACACTGGCCGAGGACCTGTCGAAAATGGAACTGCAGGTGGATGTCGACGAGGCCGATGTCGGGCAGGTCACAGTCGGGCAAAAAGCCCAATTCACCGTCGATGCCTGGCCGGGACGCGAATACAGCGCCGTCATCAGCCGGGTGGGCTACGGTTCGCAGGAAAAAGACGGCGTCGTGTCGTACCTGACGGTGCTCGACGTGGCCAACGACGATCTCAGCCTGCGCCCCGGCATGACCGGCACGGCCGAGATCGTGACGCTCACGCGCGAACAGGCGCTGCTCGTGCCCAACGCCGCGCTGCGCTTCACCCCGGCCAGCGCGCCGGCCGCCGCCAGCCCGTCCGGCGGCGGCATCATGCGCTTCATGATGCCGCGCCCGCCGCGCAGCGAACCGCGCCAGCAGGCCCCCGAACCGGCCAACGGCACGCATCGCGTCTGGACCCTGAAAGACGGCCAGCCTGTCGCCATCACCGTGAAAACCGGGGCCACCAACGGCCGCGTGACCGAGATCGTCGGCGGCGACCTGAAGACCGGCACCCCGCTCATCACGGAAACCGAAAGCGCCCCCAAATGA
PROTEIN sequence
Length: 399
VGILAILVLLAGWLSRDNAERTAPRYKTVATTTGTLVVHVSATGNLQPTNQVEVGSELSGIMDQVYVDENDRVKRGQILARLDLSKLKDAVAKSRASLAAADAQVLQAQATTAEARATLTRYREVARLSGGKVPSQTEMDAAEANLKRAEANEASTRASVVQARANLQSDETNLGKASIRSPIDGVVLSRKVEPGQTVAASFQAPVLFTLAEDLSKMELQVDVDEADVGQVTVGQKAQFTVDAWPGREYSAVISRVGYGSQEKDGVVSYLTVLDVANDDLSLRPGMTGTAEIVTLTREQALLVPNAALRFTPASAPAAASPSGGGIMRFMMPRPPRSEPRQQAPEPANGTHRVWTLKDGQPVAITVKTGATNGRVTEIVGGDLKTGTPLITETESAPK*