ggKbase home page

SCNpilot_expt_500_p_scaffold_33359_2

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: 1115..1615

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor id=12498535 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 167.0
  • Bit_score: 337
  • Evalue 9.60e-90
  • rbh
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 163.0
  • Bit_score: 257
  • Evalue 3.00e-66
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 167.0
  • Bit_score: 273
  • Evalue 2.40e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGAGCTGTCTGATGAACGCCTGGGGCGAGCATGAAGCCGAACTGCGCGGCTGGCTGCGCAGTAGATTGGGCAATGCTCACGATGCCGAGGACATGCTGCAGGACCTGTTTCTCAAGGCTATGCGCCAGGACAGAAAATTCTGCGAGATCGCCAATGCGCGCGCCTGGCTGTTCGAAGTGGCGCGCAACGCCATCGCCGACCGCCTGCGCCTGAAAAAGGACCAGGTCGAATTGCCGGACGATCTCGTCGCCGAACACGACGAGCCCGCCGCGGTGGAATCCCTGGCCGCCTGCCTGCCGCGCGCGCTGTCCGAGCTGTCGGACGAGGACCGTGAGGCCATCACCCGTTGCGACCTCGAAGGCATGAGCCAGGAGGACTACGCGCATTTGAAAGGGCTCACCTTGCCCGGCGCCAAATCGCGCGTGCAGCGCGCACGCAAGCGGCTGCGCGAGGATCTCAGCGACGCCTGCCAGGTGAAGTTCGACGCGGCGGGCAAGGTC
PROTEIN sequence
Length: 167
MSCLMNAWGEHEAELRGWLRSRLGNAHDAEDMLQDLFLKAMRQDRKFCEIANARAWLFEVARNAIADRLRLKKDQVELPDDLVAEHDEPAAVESLAACLPRALSELSDEDREAITRCDLEGMSQEDYAHLKGLTLPGAKSRVQRARKRLREDLSDACQVKFDAAGKV