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SCNpilot_expt_500_p_scaffold_42862_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: 3..119

Top 3 Functional Annotations

Value Algorithm Source
Fis family transcriptional regulator id=12498042 bin=THIO_MID species=Thioalkalivibrio thiocyanodenitrificans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 39.0
  • Bit_score: 79
  • Evalue 1.10e-12
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 38.0
  • Bit_score: 71
  • Evalue 7.20e-11
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACL71178.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 38.0
  • Bit_score: 71
  • Evalue 3.20e-10

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Taxonomy

Thioalkalivibrio sulfidiphilus → Thioalkalivibrio → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 117
TTCATCCGCAAGACGCTGCGCGAGACGCGCGGCGACCGCGCGCTTGCCGCCGACATTCTCGGCATCGACAAATCGACGCTGTGGCGCAAGGTCAAGCGCTACGGCATCGAGGAATAA
PROTEIN sequence
Length: 39
FIRKTLRETRGDRALAADILGIDKSTLWRKVKRYGIEE*