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SCNpilot_expt_500_p_scaffold_45596_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: comp(3..533)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator id=12498390 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 177.0
  • Bit_score: 347
  • Evalue 7.50e-93
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 168.0
  • Bit_score: 234
  • Evalue 2.90e-59
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADJ22544.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 168.0
  • Bit_score: 234
  • Evalue 1.30e-58

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Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGAAGAAAACGCAGACGAGTAGCGCCAACGTCTTCATCATCGACGACAACGCGGCCGTGCGCGATGCGATCCGCTGGCTGGTCGAGCAGGTGGGTCTGAATGCGCGGACCTTCGCGTCCGCACGGGAATTTCTCGACGCCTTCCGGCCGGGCATGCGCGGCTGCCTCGTGCTCGACATCCGCATGCCGGGCATGAGCGGGCTCGACCTGCAGGAAAAACTGGCCCAGGAGGGTGCACACATGCCGGTGATCATCGTGACCGGGCACGGGGACGTGCCGATTACGGTCCGTGCGATGAAGAGCGGGGCATTCGAATTCCTGCAGAAGCCCTTCAACGATCAGACCCTGATCGACGCGATTCAGGCCGCGCTCGAAAAATACGGCGAGATATGGGACCAGGAAGACCGGCGCGAACGCGCCAGCCGCAGCCTGGCGACCCTGACGCGGCGCGAACGCGAAGTGCTCGACCTGCTGCGGCGGGGCAAGCCCAACAAGGTGATCGCGGCCGAACTGGGCCTGTCGGTCCGGACG
PROTEIN sequence
Length: 177
MKKTQTSSANVFIIDDNAAVRDAIRWLVEQVGLNARTFASAREFLDAFRPGMRGCLVLDIRMPGMSGLDLQEKLAQEGAHMPVIIVTGHGDVPITVRAMKSGAFEFLQKPFNDQTLIDAIQAALEKYGEIWDQEDRRERASRSLATLTRREREVLDLLRRGKPNKVIAAELGLSVRT