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SCNpilot_expt_500_p_scaffold_51349_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: 3..557

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator (EC:4.2.1.1) similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 173.0
  • Bit_score: 214
  • Evalue 3.30e-53
transcriptional regulator, LysR family id=12498114 bin=THIO_MID species=unknown genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 185.0
  • Bit_score: 376
  • Evalue 1.20e-101
  • rbh
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:EGQ61162.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.5
  • Coverage: 173.0
  • Bit_score: 214
  • Evalue 1.50e-52

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Taxonomy

Acidithiobacillus sp. GGI-221 → Acidithiobacillus → Acidithiobacillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
TCCGACAGTCTGGTGGACATCATCGACCAGGGTTACGACCTGGCGGTACGCATCGGTGAGTTGAAGGATTCGAGCCTGGTCGCCAAGTCGATCGGCCTGGATCGCAGGGTGGTCGTCGCCACGCCATCCTATCTGGCCCGATACGGCGCACCGCGCACTCCGCAGGAGCTGGCCGGACACAATGCCCTTCTGTTTGCCGGCACCGACCATTGGAGCTTCACGGGCCCGAGTGGAGAGGAGGTGAACATCAAGGTCAGCGGCAACCTCGATACCAACAATTGCGATGCCCTTCGCGAGGCGATCTATGCCGATCTCGGGCTGGCGCTGCGCCCGCTGTGGGATGTATGGAAGGATCTGCGCGATGGCGGGCTGGTCCGGCTGCTACCCGCTTATATACCGCCCGTCTATCCCATCAATGCGGTTTACCCAAGCCGGCGCCTGATGCCAAAAAAGACCAGAATATTCATCGAGCACCTGCTGCAGCGATTTGGCCCCATCCCTTATTGGGATGATCTTGTCGGCGAGGCACCAGCCGATGCGGCGCGCACCAGCTAA
PROTEIN sequence
Length: 185
SDSLVDIIDQGYDLAVRIGELKDSSLVAKSIGLDRRVVVATPSYLARYGAPRTPQELAGHNALLFAGTDHWSFTGPSGEEVNIKVSGNLDTNNCDALREAIYADLGLALRPLWDVWKDLRDGGLVRLLPAYIPPVYPINAVYPSRRLMPKKTRIFIEHLLQRFGPIPYWDDLVGEAPADAARTS*