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SCNpilot_expt_500_p_scaffold_52622_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: 2..490

Top 3 Functional Annotations

Value Algorithm Source
outer membrane autotransporter barrel protein id=12496451 bin=THIO_MID species=Pseudomonas alcaliphila genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 163.0
  • Bit_score: 331
  • Evalue 3.90e-88
putative autotransporter protein similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 162.0
  • Bit_score: 171
  • Evalue 1.60e-40
Tax=BJP_08E140C01_Dechloromonas_61_78 similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 163.0
  • Bit_score: 204
  • Evalue 1.30e-49

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Taxonomy

BJP_08E140C01_Dechloromonas_61_78 → Dechloromonas → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
GCCAGCTACGACAGCCGCTCCACCCATCTCGGCGCCGGGATCGGACGCACATATACCCTCAACGACCGCACCAGCCTCATCCCCTCCGCTCGTCTCGATTACACCTGGTTCAGGGACGAGTCCTATACGGAAACCGGCGCGGGCCCTCTCAATCTGCAGGTCAATGCCCGCACGAGCGAAGCCCTGCTCGTCGCGCTGGATGCCCGGCTGAACCACCGGATCGATGACCGGATCACGCTGATGGCCAATATCGGCGCCGGCTACGACCTCATCAACGAACGCGCCGCAATCACCTCGGCATTCGCGGGCGCACCGGGTGCCAGCTTCGTGACCTACGGCATCGACCCCGGCCCCTGGATCGGACGAGGCGGACTGGGCGCGATCTATACGCCGCGCGACGATCTCGAAGTCACGGGCCGCTACGATGTGGAGCATCAAAGCGGCTACCTCAACCAGACCGCGTCGGTGAAATTCAACTGGGCGTTCTGA
PROTEIN sequence
Length: 163
ASYDSRSTHLGAGIGRTYTLNDRTSLIPSARLDYTWFRDESYTETGAGPLNLQVNARTSEALLVALDARLNHRIDDRITLMANIGAGYDLINERAAITSAFAGAPGASFVTYGIDPGPWIGRGGLGAIYTPRDDLEVTGRYDVEHQSGYLNQTASVKFNWAF*