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SCNpilot_expt_500_p_scaffold_19698_2

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

partial RP 2 / 55 BSCG 5 / 51 ASCG 3 / 38
Location: 1605..2597

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UV22_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 334.0
  • Bit_score: 282
  • Evalue 5.50e-73
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 334.0
  • Bit_score: 282
  • Evalue 1.70e-73
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ADU37534.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.2
  • Coverage: 334.0
  • Bit_score: 282
  • Evalue 7.80e-73

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGACCGCCCAGGCCGCCGCTTCGCCGCTGCTCGCGAGCTTTCGCGACAGCTACCGCGACCTCGTGCGCTACCTCACGCGCCGCACCGGCAGCGCCGATGAGGCCCGCGACGTGGCGCACGATACCTGGCTGCGTCTGGCCGACATGAGCCTGCGCGACACCCCGCCCGTGCAGTGCGAATCCGAGGCCCGCGCCTACGTCTTCACCATGGCGCGCAACCTCGTCACCGACCGCCGCCGCCACGACAGCGTGGCACAGCGCCACGCACAGGCCCAGCCCGGCGGCGGCCAGGGCGTGCCCGACGAGTCCGAGGCGCTGATGTACCGCCAGGCCATCGACGCGGTCGAGGCCGCGCTGGCCACCGTGCCCGAGCGCGCGCGCCAGGTCTTCCTTCGTCACCGCGTCAACGGTGAGGACCAGGGCGCGCTGGCGGCCGAGTTCGGCATCTCGCGCAACATGGTCGAGCGCGACATGATGCTGGCCATGGACCGGGTGCAGGCCGCCATGGAACAGTGGCACGGCGGCGCAGCGCCCGCCACGCGCCAGGGGCGCCGCCGCGCGCTCTCGGGGCTGCTGGGCATGGCCGGCCTTGCGGTGCCGGGCGCGTTCGCATGGCGCTGGTGGCGCATCGCCGTGCCCCAGTGGCAGCAGGCCGCCGCCACCGGCCACGGGCAGACGCTGCGCCAACCCCTTCCCGACGGCGGCGCCGTCACACTCGACGCGCAAAGCCGCGTGCAGGTCGCCTACTACGCCGCCCGCCGCAGCGCCCAACTGCTCGCGGGCGCCGCCTTCTTCGAGGTGGCGCGCGATGCAGGCCGCCCCTTCGTGGTGGACGTGCCCGGCGCGCAAGGCGCCGTGCGCATCACCGTGCTGGGCACCCGCTTCGGCGTGGAGCGGCTGCCTGGCGGCGCGGTGGACGTGCAGGTGGAATCGGGCCGCGTGCGCGTCGAATCGCTCGACGCCGAAGGCCACCCGCGCACCACCCACGAACTG
PROTEIN sequence
Length: 331
MTAQAAASPLLASFRDSYRDLVRYLTRRTGSADEARDVAHDTWLRLADMSLRDTPPVQCESEARAYVFTMARNLVTDRRRHDSVAQRHAQAQPGGGQGVPDESEALMYRQAIDAVEAALATVPERARQVFLRHRVNGEDQGALAAEFGISRNMVERDMMLAMDRVQAAMEQWHGGAAPATRQGRRRALSGLLGMAGLAVPGAFAWRWWRIAVPQWQQAAATGHGQTLRQPLPDGGAVTLDAQSRVQVAYYAARRSAQLLAGAAFFEVARDAGRPFVVDVPGAQGAVRITVLGTRFGVERLPGGAVDVQVESGRVRVESLDAEGHPRTTHEL