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SCNpilot_expt_500_p_scaffold_54845_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 0 / 55 BSCG 1 / 51 ASCG 0 / 38
Location: comp(1..657)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Sphingomonas sp. LH128 RepID=J8VP87_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 208.0
  • Bit_score: 160
  • Evalue 1.60e-36
Regulatory protein TetR {ECO:0000313|EMBL:EZP78307.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 208.0
  • Bit_score: 160
  • Evalue 2.30e-36
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 194.0
  • Bit_score: 141
  • Evalue 3.20e-31

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Taxonomy

Novosphingobium resinovorum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
TTGCTCCTCAACGCCGAGCGCCTGTTCGCCACGAAGGGGATCGGCGCAACCTCGCTGCGGGAGATCGCGACGGCGGCGGGCACGAGCAACAACAATGCCGTCCAGTATCATTTCGGGTCGAAGGCCGCGCTGCTCAACGCGATCTATTTCCATCGCATCGCATGTCTTGAACCGATTCGCTCGGAAATGCTTGCACGAGCAGAAGAACGGGGCGTGGCGGCCGCGCCGGCGGTATTGTTGCAGATCCTCTGCCTCCCCCATGTCTCACTGGCGGCGGAAGACGGCTCTCACCCATATGCCGGGTTTCTCGTTCAATATGTAACGCGCCACTGGCATGAAAGCCTGACCGAAGTAGCAAGGGAAACACAGCGGGTCGCGCCGACCCTCCATGACCTTGTCGCCAGATTGGCCGCCAAGGTCGAGGGCACCTCCGATACTTTGGCGCGCGCACGCGTAATGCTTTGCAACCTGATGTTTCTGAACGCCTTGCTGCGATGGGACAATATTGGCCGGCACGCGAGCGATCTGTCGCTCAAGGCCGTTCTGGATGACGCACTCACGGCTGCCCGCGCGGCGCTCTGCGCGCCCTCGAACGAGGACGCGACGGCGCCCGATCTCTTCGCGGATTTATTTCCGGGCCTCCTTTCGCAACCCGCT
PROTEIN sequence
Length: 219
LLLNAERLFATKGIGATSLREIATAAGTSNNNAVQYHFGSKAALLNAIYFHRIACLEPIRSEMLARAEERGVAAAPAVLLQILCLPHVSLAAEDGSHPYAGFLVQYVTRHWHESLTEVARETQRVAPTLHDLVARLAAKVEGTSDTLARARVMLCNLMFLNALLRWDNIGRHASDLSLKAVLDDALTAARAALCAPSNEDATAPDLFADLFPGLLSQPA