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SCNpilot_expt_500_p_scaffold_38820_1

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 2 / 55 BSCG 3 / 51 ASCG 1 / 38
Location: 3..1400

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, permease protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F081_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 267.0
  • Bit_score: 226
  • Evalue 6.60e-56
Lipoprotein releasing system transmembrane protein LolC {ECO:0000313|EMBL:EYF03937.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 477.0
  • Bit_score: 482
  • Evalue 5.50e-133
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 267.0
  • Bit_score: 226
  • Evalue 2.10e-56

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1398
TATCTCGGCTCGAAGAAGCGTGCCTTCGTCTCGGTGGGCACGGCGTTCGCGATGCTCGGTGTCGCGCTCGGAGTGGCAGCGCTCGCGATCGTGATGAGCGTCACCGGCGGCTTCCAGGAGCAGTTCCGGGAGAAGGTGCTCGGGGTCAACGCTCACGTCATCGTGCTGAAGTACGCGGTGCACTTCCGCGACTACCGCGACGTGATGAAGAAGGTCGAGCGCGTCCCCGGCGTCGTCGCGGTCGCGCCCTTCGTCATCAACCCGATGATGGTGACCCACGGCGAGCGCACCGCCACCGGCGTCCTCTTGAAGGGCGTCGATCCGGAGCTCATGCCGAAGGTCCTCGACCTGCCCCGGCACATCGTCGAGGGGTCGCTCGACGGGATGCGCAAGCCGGGCGCGAAGCCGCCCGAGGCGCCCCGCGACTCGTTCTCACCGGGCAACGGCGGAAGCTGGGAGCCCGGGAAGACGGGCATGGGCAGCGGTGCAGACTCGGACTCCGGCGCAGGCACGGGGAAGCTGAGCGTGCTCGAGGCGATCGAGCGACAGATTGCGGAGGACAAGGCGCAGGACGCCGCCGCGGACGCTGGGACCTCCGACCTCGCGACCCTCATCGCAACCGGCGCTGCCGGCGAGATCGCGACCGGCGAGAACGAGAAGCCGAAGGCGACGCCCTCCGCCGATCCGCTCGACGCGATCCTCGCCGCGCCGGCCGCAAACACGAACACGACTGCGCCCGCGAAGGACGAGCCCCCGCCTCCGCTTCATCCCGCCGCGGACGTCACGCCCTCAGGCGGCTACACGAGCACGCTGCCAGAGGACGACTTCCTTCCCGAGGCGATCGATCCCGATCCCTGCCGCAGCCCGGAGCAGGTGAATACACTCCCGGGCGTCGTCATCGGCAAGTCGCTCTCGAAGCGGCTCGCTGTCGGGCTCGGTGACTGCCTCCAGATCACGTCGCCGCAGATCGGCATGTCGTACGGTGCCAGCGGCGCGCGCCCGCCGATCGCGAAGCAGTTCCGCGTGATCGCGCTCTTCGAGGCTGGGTTCGACCAGTACGACTCGAAGCTCGTCTACACCGACCTCTACGAAGCCCAGGCCTGCTACGAGCAGGGCGACAGCGTCACCGGCGTCGAAGCGAAGGTCGACGACATCGAGAAGGCGGCCGACATCGCGAAGCAGGTCGACAAGATCCTCGCGAACGGCGTCTATCACACGATGGACTGGAGGGAGCTCAACCACGGGCTCTTCACGGCGCTGCTCATCCAGCAGATCGCGATGAGCGTCGTGCTCACGCTCATCATCGTCGTGGCGGCCTTCACCGTCATCGCGACCCTCATCATGGTCGTGCTCGACAAGAAGAAGGAGATCGCGCTCCTCAAGGCGATCGGCGCGAGC
PROTEIN sequence
Length: 466
YLGSKKRAFVSVGTAFAMLGVALGVAALAIVMSVTGGFQEQFREKVLGVNAHVIVLKYAVHFRDYRDVMKKVERVPGVVAVAPFVINPMMVTHGERTATGVLLKGVDPELMPKVLDLPRHIVEGSLDGMRKPGAKPPEAPRDSFSPGNGGSWEPGKTGMGSGADSDSGAGTGKLSVLEAIERQIAEDKAQDAAADAGTSDLATLIATGAAGEIATGENEKPKATPSADPLDAILAAPAANTNTTAPAKDEPPPPLHPAADVTPSGGYTSTLPEDDFLPEAIDPDPCRSPEQVNTLPGVVIGKSLSKRLAVGLGDCLQITSPQIGMSYGASGARPPIAKQFRVIALFEAGFDQYDSKLVYTDLYEAQACYEQGDSVTGVEAKVDDIEKAADIAKQVDKILANGVYHTMDWRELNHGLFTALLIQQIAMSVVLTLIIVVAAFTVIATLIMVVLDKKKEIALLKAIGAS