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SCNpilot_expt_500_p_scaffold_45624_2

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 2 / 55 BSCG 3 / 51 ASCG 1 / 38
Location: 529..1215

Top 3 Functional Annotations

Value Algorithm Source
ECF family RNA polymerase sigma factor n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UA51_MYXSD similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 231.0
  • Bit_score: 295
  • Evalue 4.40e-77
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 231.0
  • Bit_score: 295
  • Evalue 1.40e-77
ECF family RNA polymerase sigma factor {ECO:0000313|EMBL:AGC43344.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 231.0
  • Bit_score: 295
  • Evalue 6.10e-77

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Taxonomy

Myxococcus stipitatus → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGAGCACCCCGTCTCGCGAACAACTGGCCGCGCTCGGCGCGCTGTCCGACACGCTCAAGACGTCGTGGCATCGATTCCTCGACCTCTACGAGCCGCTTCGTCCGGAGCTCTTTCGCTACTGCCGGTACCTGACGCGGAGTCCATGGGACGCGGAGGACCTCGCGCAGGACGCCCTGGCACGCGCATTCGTCACGATGGGCTGCATGAACCAGGCGCCGCCCAATCCGCGGGCCTGGCTGTTCCGCGTCGCCTCGAACCTGTGGATCGATCGGACCCGACAGCAGCGCGAGGCCCCCGGCAGCGCACCCGAGATCGCGTCGACCGAAGCCGAGGTCGCGTCGCACGAGCCGCGTGTCACCCGCGAGGCGGCAGGGACGCTCATCGCCCGGCTCTCGCCGCAGGAGCGTGCCGCCGTCGTCCTGAAGGACGTCTTCGATCTCACGCTCGAAGAGACCGCCGAGGCGCTCTCGACGACCACGGGTGGAATCAAGGCCGCGTTGCACCGCGGACGCGGAAAGCTGATCGAGCCCGCCCCGCACGAGGAGCGCACGACGACGCCGGCGGTGCTCGACGCGTTCTGCGAGGCCTTCAACGCGCGCGACCTCGATCGTCTCACCGCACTGCTGCTCGACAACGTCACGGTCGAGGTCGTCGGCGTCACGACCGAATACGGCCCCGAAGCCGCG
PROTEIN sequence
Length: 229
MSTPSREQLAALGALSDTLKTSWHRFLDLYEPLRPELFRYCRYLTRSPWDAEDLAQDALARAFVTMGCMNQAPPNPRAWLFRVASNLWIDRTRQQREAPGSAPEIASTEAEVASHEPRVTREAAGTLIARLSPQERAAVVLKDVFDLTLEETAEALSTTTGGIKAALHRGRGKLIEPAPHEERTTTPAVLDAFCEAFNARDLDRLTALLLDNVTVEVVGVTTEYGPEAA