ggKbase home page

SCNpilot_expt_500_p_scaffold_54042_1

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 2 / 55 BSCG 3 / 51 ASCG 1 / 38
Location: 3..545

Top 3 Functional Annotations

Value Algorithm Source
EAL domain/GGDEF domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GF69_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 176.0
  • Bit_score: 151
  • Evalue 6.20e-34
Response regulator of zinc sigma-54-dependent two-component system {ECO:0000313|EMBL:AKF03131.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 178.0
  • Bit_score: 180
  • Evalue 2.30e-42
diguanylate phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 176.0
  • Bit_score: 156
  • Evalue 1.00e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sandaracinus amylolyticus → Sandaracinus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
CAGGAGGTCGGCCGTCGCGTCCGTGAGCTCGCGGCGACGACGTTCCGCCCACCGGACGACGGGATGATCCTCTTCGTCAATCTCCATCCGGCGGATCTGCTCGACAGCAACCTCTACGACCGGCACGCACCGATGACGAAGATCGCGGATCACGTCGTCCTCGAGATCACGGAGCGCGCCGCGCTCGACGACGTGACCGAAACGAAGCACCGCAGCGCCGAGCTGCGCCGCCGTGGCTTCAAGCTCGCCATCGACGATCTCGGTGCGGGTTACGCAGGGCTCACCAGCTTCGCCACGTTCGAGCCCGAGGTCGTGAAGCTCGACATGACCCTCATCCGTGGAATCGAGGCGTCGACGGTGAAGAAGCACGTCGTCGAGTCGATGACGCGCCTCTGTCGCGAGCTCGACATGAAGGTCGTCGCCGAGGGCATCGAGACTATGCCGGAGCTCGCGACGATCATCGACCTCGGCTGCGACTACTTGCAGGGCTACTTGCTCGGTCGCCCGGGCCCCGCGCTCGTCCCCTCGTCCCAGACCTGGTAA
PROTEIN sequence
Length: 181
QEVGRRVRELAATTFRPPDDGMILFVNLHPADLLDSNLYDRHAPMTKIADHVVLEITERAALDDVTETKHRSAELRRRGFKLAIDDLGAGYAGLTSFATFEPEVVKLDMTLIRGIEASTVKKHVVESMTRLCRELDMKVVAEGIETMPELATIIDLGCDYLQGYLLGRPGPALVPSSQTW*