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SCNpilot_expt_500_p_scaffold_51335_1

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 2 / 55 BSCG 3 / 51 ASCG 1 / 38
Location: 2..529

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U9M0_METS4 similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 184.0
  • Bit_score: 85
  • Evalue 6.90e-14
triple helix repeat-containing collagen similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 184.0
  • Bit_score: 85
  • Evalue 2.20e-14
Collagen triple helix repeat {ECO:0000313|EMBL:ACA17872.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.7
  • Coverage: 184.0
  • Bit_score: 85
  • Evalue 9.70e-14

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Taxonomy

Methylobacterium sp. 4-46 → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
GAGAAATCGTGCTCGTCCGGCGCAGACTTCGGAGCGACGGGCACCTTGGGCTCGGAGACCACGGGCTTCGCGGCGGCGGGCACCCTGGGCTCGGAGACCACGGGCTTCGTGGCGACGGGCACCCTGGGCTCGGAGAGCGCGGGCTTCGCGGCGACGGGCACCCTGGGCTCGGAGAGCGCGGGCTTCGCGGTGGGGACTCGCGCAGCGGAGGTCGGGGCCTTCGGGGCGACGGGCGCCTTCGGCTCCGAGAGAGAGGGCCTGGCGGCTGCAACCTCGGGCTCCGCGATCGGGACCGCGGGCTCGGGCCTGGCGGCCGGGACCTCGGGCGTGGGCATCTCCACGGCGAGCGCCGCGGGCGGTGCCGGCGGCATGAGGGACTCGCGCCGGATCGCTTCGGCCACCGACTCGTCGCTGATGTCCGAGTACGAGGGCATCGCACGGCGGGGCGCGTCGGGCGTCGAGCCTGCTCGCGGCACGGGCGGCGCAGCCGCAGGCGCCGGCGCCTCGGTTGCGGTCTCGATGACCTGA
PROTEIN sequence
Length: 176
EKSCSSGADFGATGTLGSETTGFAAAGTLGSETTGFVATGTLGSESAGFAATGTLGSESAGFAVGTRAAEVGAFGATGAFGSEREGLAAATSGSAIGTAGSGLAAGTSGVGISTASAAGGAGGMRDSRRIASATDSSLMSEYEGIARRGASGVEPARGTGGAAAGAGASVAVSMT*