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SCNpilot_expt_500_p_scaffold_57262_1

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 2 / 55 BSCG 3 / 51 ASCG 1 / 38
Location: comp(28..1002)

Top 3 Functional Annotations

Value Algorithm Source
Type III secretory pathway, component EscV n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJK5_CHLTF similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 205.0
  • Bit_score: 181
  • Evalue 1.00e-42
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:AKF07843.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 316.0
  • Bit_score: 212
  • Evalue 1.30e-51
type III secretory pathway, component EscV; K03230 type III secretion protein SctV similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 205.0
  • Bit_score: 181
  • Evalue 3.10e-43

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Taxonomy

Sandaracinus amylolyticus → Sandaracinus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
CCACGTCCGATCGCGCCCGCGGCGGGTGGGCGGCGAACGGAGACGCCCTTCGTCCCGATCGTCGTGCCGTGGAGCATCGAGGTGAGCGAGGACCTCGCGAGCGCGCTCGAGGACGCGAACGAGGACGGCGAGCGGCTCGGCCTCCGGTCGGAGGCGCTCGCGCTCAGGGAGCGCCTCTTCTCCGAGCTCGGAGTCCCCCTCCCCGCGCCGCGCGTCCGGGTCGCGCCGGGCCTCCCCGCACGCCACGCCGTGCTCTCGCTCTTCGAGGTCCCTGCGCGCGTGATGCCCGTCATCCCCGACGGCACCGGCGACGGCGAGGTCGTCCGCGTCGTCGCCGACGCCGCCGCCGAGCTGCTTCGCGGGCGCGCGGCCGATTTCCTCGGCCTCGCGGAGACCCAGCGCCTGCTGGACGAGCTCGAGCAGTTCGCGCCCGCCACCGTCCGCAACGTCGTCCCGAAGCCCGTCACGCTGACGTTGCTCACCGACGTCCTCCGCCGCCTCCTCGAGGAGCGGGTGTCGATCCGCGACCTCCGCGCCATCCTCGAGGCGCTCGCGTCACTCGCCGCTACGGAGAAGGATCCGCTCACCCTCACCGAGCTCGTTCGCGCTCAGCTCCGGCGTGCGCTCACGTTCAAGCTCACACGCGGCGCCACCCAGCTCGGCGTCGTCCTCGTCGATCCGACGATCGAGGACACCATCCGGCGCGCGATCCAGCGCACGCCTGCAGGCGCGTTCCTCACGCTCCCGCCGGCGGCAGCGCGGGACGTCATCGCGGCGCTCCGCCGTGCCGGCTCGGAAGCGACGACACAGGGCGCGGCAGCGCCTGTGTTCCTCACGCAGCCCGACATCCGCCGCTTCATGCGAAAGCTCCTCGAGACCGAGGTCCCCGACGCGACGGTAGTGAGCTTCGCCGAGCTCCTCCCCGAGGTCACGCTCCGCCCGGTGGCGCGCGCGAACCTCGCCGGGATCGGCTGA
PROTEIN sequence
Length: 325
PRPIAPAAGGRRTETPFVPIVVPWSIEVSEDLASALEDANEDGERLGLRSEALALRERLFSELGVPLPAPRVRVAPGLPARHAVLSLFEVPARVMPVIPDGTGDGEVVRVVADAAAELLRGRAADFLGLAETQRLLDELEQFAPATVRNVVPKPVTLTLLTDVLRRLLEERVSIRDLRAILEALASLAATEKDPLTLTELVRAQLRRALTFKLTRGATQLGVVLVDPTIEDTIRRAIQRTPAGAFLTLPPAAARDVIAALRRAGSEATTQGAAAPVFLTQPDIRRFMRKLLETEVPDATVVSFAELLPEVTLRPVARANLAGIG*