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SCNpilot_expt_1000_bf_scaffold_4153_9

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(7503..7796)

Top 3 Functional Annotations

Value Algorithm Source
(S)-2-haloacid dehalogenase 1 {ECO:0000313|EMBL:EYR79777.1}; EC=3.8.1.2 {ECO:0000313|EMBL:EYR79777.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 96.0
  • Bit_score: 175
  • Evalue 5.20e-41
putative S-2-haloacid dehalogenase; K01560 2-haloacid dehalogenase [EC:3.8.1.2] similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 96.0
  • Bit_score: 142
  • Evalue 6.40e-32
(S)-2-haloacid dehalogenase 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D5K0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 96.0
  • Bit_score: 175
  • Evalue 3.70e-41

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 294
ATGTCCCATGCCGCCTATGTGTTCGACGCCTATGGCACGCTGTTCGACGTGCATGCGGCGGTGCGGCGCCATGCGGGGGACGTGGGGCCGAACTACCAGATCTTCTCCGAGATCTGGCGCGCCAAGCAGCTCGAATATTCCTGGACGCGGGCGCTGATGGGCGCCTATGCCGATTTCTGGCAACTCACCGAGCAGGCGCTGGACTACACGTTCCAGCGCATCGGCGGCGTCGACCCGGCGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCCGGCCGTGCTGA
PROTEIN sequence
Length: 98
MSHAAYVFDAYGTLFDVHAAVRRHAGDVGPNYQIFSEIWRAKQLEYSWTRALMGAYADFWQLTEQALDYTFQRIGGVDPAXXXXXXXXXXXXXCRPC*