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SCNpilot_expt_1000_bf_scaffold_4153_12

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 9434..10282

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain-amino-acid aminotransferase IlvE {ECO:0000313|EMBL:EYR79780.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EYR79780.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 294.0
  • Bit_score: 477
  • Evalue 1.40e-131
ilvE1; branched-chain-amino-acid aminotransferase IlvE (EC:2.6.1.42) similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 294.0
  • Bit_score: 449
  • Evalue 7.00e-124
  • rbh
Branched-chain-amino-acid aminotransferase IlvE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXN4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 294.0
  • Bit_score: 477
  • Evalue 1.00e-131
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGCCAGTCGATACTTCACCACGCACGACGACCTGGACCTTCGTTGACGGCGAATGGATTTCCGGCAACCCGCCGCTCATCGGCCCGACATCGCATGCCATGTGGCTCGGCTCGACCGTCTTCGACGGCGCACGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCTCTTCGGAAGAGATCGAGGCGCTCGCCCTGGAGGGCGTCCGCAAGTTCGACGGCAGGACCGCGATCTACATCAAGCCGATGTACTGGGCCGAGCACGGCTCGCCGATCAGCGTCGTCGCGCCGGATGCGGACTCCACCCGCTTCGCGCTCTGCCTCTTCGAGGCCTCGATGGGCGATCCCAAGGCCGGCTCCTCGCTGACCCTCTCGCCCTTCCGCCGCCCGACGGTGGAATGCATGCCGACGGATGCCAAGGCCGGCTGCCTCTACCCGAACAATGCCCGCATGCTGGTGGAGGCCCGCAGGCGCGGCTTCGACAACGCGCTGGTGCGGGACATGCTGGGCAACGTCGCCGAGACGGCCTCCTCCAACATCTTCATGGTCCGCGACGGGGTGATCTTCACCCCGGCCGCCAACCGCACCTTCCTTGCCGGCATCACGCGCAGCCGCGTCATCGGCCTGCTCAGGGACGCGGGCTTCGAGGTGATGGAAACCACGCTCACCCCCGCCGACTTCGCCGCCGCGGACGAGATCTTCACCTCGGGCAACTATTCCAAGGTCGTCCCCGTCACCCGCCTGGAGGACCGCGACCTCCAGCCCGGCCCCGTCACCGCCAAGGCCCGCGACCTCTATTTCGACTGGGCGCATTCGAACGGCGACGCGTGA
PROTEIN sequence
Length: 283
MPVDTSPRTTTWTFVDGEWISGNPPLIGPTSHAMWLGSTVFDGARXXXXXXXXXXXXXXXXASSEEIEALALEGVRKFDGRTAIYIKPMYWAEHGSPISVVAPDADSTRFALCLFEASMGDPKAGSSLTLSPFRRPTVECMPTDAKAGCLYPNNARMLVEARRRGFDNALVRDMLGNVAETASSNIFMVRDGVIFTPAANRTFLAGITRSRVIGLLRDAGFEVMETTLTPADFAAADEIFTSGNYSKVVPVTRLEDRDLQPGPVTAKARDLYFDWAHSNGDA*