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SCNpilot_expt_1000_bf_scaffold_3587_4

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 3310..4032

Top 3 Functional Annotations

Value Algorithm Source
High-affinity branched-chain amino acid transport ATP-binding protein BraG n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CM43_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 240.0
  • Bit_score: 433
  • Evalue 1.80e-118
  • rbh
High-affinity branched-chain amino acid transport ATP-binding protein BraG {ECO:0000313|EMBL:EYR78652.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 240.0
  • Bit_score: 433
  • Evalue 2.60e-118
putative branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 240.0
  • Bit_score: 371
  • Evalue 2.10e-100

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGACGAACATATTGAGCGTTGAAAATGTCGAACTCTACTACGACCACATCTATGCGCTGAAAGGCGTCTCGATCGACGTGGGCGAAGGCGAGACCGTCGCGCTGATCGGCGCGAACGGCGCGGGCAAGTCCTCGATCCTGCGGGCGATCACGGGGCTCCGGCCGATCAAGTCCGGCCGGATCACCTACCAGGGCGAAAAGCTCGACGGCACGCCCGCCGCCGAGATCGTCCGCCGGGGCATCTCCATGGTGCCGGAGGGCCGCCGCGCCTTCCCGCTGATGTCCGTCAAGGACAACCTGCTGATGGGCGCCTTCACCCGCACCGACAAGGCGGAGATCGAGCAGACGCTGGAGAACGTGCTGACGCGCTTCCCGCGCCTGAAGGAACGCTATCACCAGCAGGCGAGCACCATGTCGGGCGGCGAGCAGCAGATGATGGTGATCGGCCGTGCCCTCATGGCCCGCCCGAAACTCCTGCTTCTCGACGAGCCGTCGCTCGGCATCGCGCCGAAGATCGTGCAGGACATCGCCCGCGCCATCGTCGCCATCAGCCGCGACGAGAAGGTCTCCATCCTCCTCGTCGAGCAGAACAGCCGCATGGCGCTCTCCATCTCCAACCGCGCCTACGCGCTTTCCACCGGGTCGATCGCGCTGTCAGGCAATTCGAAGGAACTGATGAACGACGACCGCATCAAGGCTGCCTACCTCGGAGGCGAACTCTGA
PROTEIN sequence
Length: 241
MTNILSVENVELYYDHIYALKGVSIDVGEGETVALIGANGAGKSSILRAITGLRPIKSGRITYQGEKLDGTPAAEIVRRGISMVPEGRRAFPLMSVKDNLLMGAFTRTDKAEIEQTLENVLTRFPRLKERYHQQASTMSGGEQQMMVIGRALMARPKLLLLDEPSLGIAPKIVQDIARAIVAISRDEKVSILLVEQNSRMALSISNRAYALSTGSIALSGNSKELMNDDRIKAAYLGGEL*