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SCNpilot_expt_1000_bf_scaffold_4003_2

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(837..1646)

Top 3 Functional Annotations

Value Algorithm Source
Heat-inducible transcription repressor HrcA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHI7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 269.0
  • Bit_score: 493
  • Evalue 1.30e-136
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 269.0
  • Bit_score: 493
  • Evalue 1.80e-136
hrcA; Heat-inducible transcription repressor hrcA; K03705 heat-inducible transcriptional repressor similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 269.0
  • Bit_score: 426
  • Evalue 7.90e-117

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGCAGGTCGGCAATATCTCCGCCGAGGACCGCGCCTCCATCGAGCGCCATGTGCGCCCGCACGGGCAGAAGCACTCGGCCGTCGAGACCATGATGAACGAGGCGAGCCAGGCCCTGTCGGGCATGTCACGCGGCGCGGGCCTCGTCATCACCACCAAGAACGACGCCGTGCTGAAGCATGTCGAGTTCATCCGGCTGGAGCCGACCAAGGCGCTGGTCGTGCTGGTGGGCGACCACGACCAGGTGGAAAACCGCATCATCGAGCTGCCGGCGGGCGTCACCGGTTCGCAGCTCACCGAGGCGGCCAACTTCCTCAATGCCCATCTTGCCGGCAACACGCTCATCGAGGCGCGCTCGCAGCTCGAGCGCCTGCGCGGCGAGATCAGCCGCGAGCTCGACAAACTGTCGCAGGGCCTCGTCGAGCGCGGCCTCGCCGTCTGGTCCGGCGGCTTCGACGAAGCCAAGCCGACGCGGCTCATCGTGCGCGGCCGGGCGAACCTGCTGGAAGGCCTCGCCGGCGCCGACGACATCGACCGGCTGCGCATGCTCTTCGACGACCTGGAGCGCAAGGACAGCCTGATCGAGCTTCTCAATCTCGCCGAGACCGGCCCCGGCGTGCGCATCTTCATCGGCTCGGAGAACAAGCTCTTCTCGCTCTCCGGTTCCTCTCTGATCGTCGCGCCCTACCGGGACAGCGACGAGAAGATCGTCGGCGCCGTCGGCGTCATCGGGCCGACGCGGCTCAACTATTCCCGTATCGTGCCCATGGTGGACTATACCGCCCAGCTCATGTCGCGGCTTTCGCGCTGA
PROTEIN sequence
Length: 270
MQVGNISAEDRASIERHVRPHGQKHSAVETMMNEASQALSGMSRGAGLVITTKNDAVLKHVEFIRLEPTKALVVLVGDHDQVENRIIELPAGVTGSQLTEAANFLNAHLAGNTLIEARSQLERLRGEISRELDKLSQGLVERGLAVWSGGFDEAKPTRLIVRGRANLLEGLAGADDIDRLRMLFDDLERKDSLIELLNLAETGPGVRIFIGSENKLFSLSGSSLIVAPYRDSDEKIVGAVGVIGPTRLNYSRIVPMVDYTAQLMSRLSR*