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SCNpilot_expt_1000_bf_scaffold_3322_10

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 6802..8091

Top 3 Functional Annotations

Value Algorithm Source
sun; tRNA and rRNA cytosine-C5-methylase (RNA methyltransferase) protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 428.0
  • Bit_score: 680
  • Evalue 4.90e-193
  • rbh
MFS transporter n=1 Tax=Rhizobium giardinii RepID=UPI00036863B3 similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 429.0
  • Bit_score: 698
  • Evalue 3.20e-198
  • rbh
tRNA/rRNA cytosine-C5-methylase {ECO:0000313|EMBL:EYR83350.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 429.0
  • Bit_score: 767
  • Evalue 1.00e-218

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1290
ATGCGATTGGGTGGGCGGCTCTCGGGGGCCATCGAGGTTCTGGCGGATATCGAGACGCGGCGGCGCCCCGTCGCCGATGCGCTCAAGGACTGGGGCCTCTCCCACCGCTTTGCCGGCTCCGGCGACCGCGCCGCGATCGGCAATATCGTCTACGACGCGCTGCGCATGAAACTGTCGCACGCCTTCCTGATGGACGACGACAGCCCCACCGCCCTCGGCCATGCCGTGCTGCTGCGCCAGTGGGGACTTGCCCCCGAGGCGCTGGCCGCCGAGTTCGAGGGCGACCGCTTCGCCCCGCAGCCGCTTTCGCAGGACGCGCTCGCTGCCTTCCACGCCCGCGACCTCGCAACGGCCCCGCTCCATGTGCAGGGCGACATTCCCGAATGGATCCAGCCGTCCTTCGAGGCGAACTTCGCCGGCGACTGGCTGGCGGAAGCAAAGGCGCTCGCCGGCCGGCCGACGCTGGATCTCAGGGCCAACACGCTCAAGGCCGGCCGCGACAAGGTGCTGAAGGCGCTGGAGCGCAACAGCGCACTCGCCTCCGCCATCGCAAGGCAGGGCATCCGCATTCCGGCCGGCGAAGGCCCGGCACGCCTTCCCAACGTCACCGCGGACCTCGCCTTCCAGAAGGGCTGGTTCGAGGTGCAGGACGAGGGCTCGCAAATCGTCGCCGACCTCGTCGTGCCCGGGGAGGGCGAGCAGGTGCTCGACTTCTGCGCCGGCGGCGGCGGCAAGACGCTCGCCATGGCGGCCGCCATGCACAACAAGGGCCAGGTCCACGCCTACGATACCGACCGCAAGCGCCTCGCCCCGATCATCGAGCGGCTGAAGCGCGCCGGCACGCGCAATGTCCAGGTCCACGAGGACATTTCCAGCCTCGCACCGCTGAAGGACCGTTTCGACCGCGTGCTGGTCGACGCTCCCTGCACCGGCACCGGCACCTGGCGCCGGCGGCCGGACACCAAATGGCGCCTCACCGAGAAGAATCTGGAGGAACGCCTCACCCAGCAGCAGGAAGCGCTCGCTAATGCCAGCGCCTTCGTGCGGCCCGGCGGCGCGCTGTTCTACGTCACCTGTTCCATCCTGCCGCAGGAGAACGAGGAACAGGTGCAAGGCTTCTGCAAGGCCAATCCGCAATTCGAGATCCTTGACGCCACGGACACCTGGCAGAAGCTGTTCGGCGCGGACACGCCGCAGCCGCGCTCGCGCGGCGGCAAGACCGTGACGCTGACGCCGGCCACCACCGACACGGACGGTTTCTTCTTCTGCGCCATGCGCCGCAAGGCCTGA
PROTEIN sequence
Length: 430
MRLGGRLSGAIEVLADIETRRRPVADALKDWGLSHRFAGSGDRAAIGNIVYDALRMKLSHAFLMDDDSPTALGHAVLLRQWGLAPEALAAEFEGDRFAPQPLSQDALAAFHARDLATAPLHVQGDIPEWIQPSFEANFAGDWLAEAKALAGRPTLDLRANTLKAGRDKVLKALERNSALASAIARQGIRIPAGEGPARLPNVTADLAFQKGWFEVQDEGSQIVADLVVPGEGEQVLDFCAGGGGKTLAMAAAMHNKGQVHAYDTDRKRLAPIIERLKRAGTRNVQVHEDISSLAPLKDRFDRVLVDAPCTGTGTWRRRPDTKWRLTEKNLEERLTQQQEALANASAFVRPGGALFYVTCSILPQENEEQVQGFCKANPQFEILDATDTWQKLFGADTPQPRSRGGKTVTLTPATTDTDGFFFCAMRRKA*