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SCNpilot_expt_1000_bf_scaffold_3322_20

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 16986..17624

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Hoeflea sp. 108 RepID=UPI000382E6F3 similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 180.0
  • Bit_score: 354
  • Evalue 5.60e-95
Integrase {ECO:0000313|EMBL:KJV42102.1}; Flags: Fragment;; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. KM4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 180.0
  • Bit_score: 317
  • Evalue 1.80e-83
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 180.0
  • Bit_score: 312
  • Evalue 1.30e-82

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Taxonomy

Brevundimonas sp. KM4 → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGCTTACCGATGCGGCAATCAAAGCACTGAAACCAAAGGACAAATTATACAAGGTCACTGACCGTGACGGTATGTATGTCGTCGTGAACCCGTCGGGCGCCGTCGTGTTCCGCTATGACTACCGTATGCACGGTCGACGCGAGACCTTGACCCTCGGCCGATACGGGCCAGCGGGCCTTTCTCTCGCCCGTGCTCGGGAAAAGCTGATCGACGCACAGCGCTCGATTCAGGAGGGGCGGTCGCCCGCCCAGGAGAAGCAGCGCGAGAAGCGCCGCATCAAGGAAGCAAAGAGCTTTGGCGAGTTTGGCGAACGCTGGCTGCAAGAGCATCGGATGGCCGAAAGCACCCGCGCCATGCGCCGCTCGATCTACGAGCGGGACATCCTGCCTACGTTCCGCAATCGGCTGCTGACGGAAATCACGCCCGAGGATCTTCGGGCGATGTGCGACAAGGTGAAGAAGCGGGGAGCGCCGGCCACGGCGGTCCATGTTCGTGACATCGTGAAGCTCGTCTTCGCCTTCGCAAAGCTGCACGGGGAGAANNNNNNNNNNNNNNNNNNGCCGAAGAGGTCGGGCCGGCGTCGATCGCGACGTTCGTTCCCAAGGACCGCTCGCTTTCGCCCGCCGAAATTCGGGTGA
PROTEIN sequence
Length: 213
MLTDAAIKALKPKDKLYKVTDRDGMYVVVNPSGAVVFRYDYRMHGRRETLTLGRYGPAGLSLARAREKLIDAQRSIQEGRSPAQEKQREKRRIKEAKSFGEFGERWLQEHRMAESTRAMRRSIYERDILPTFRNRLLTEITPEDLRAMCDKVKKRGAPATAVHVRDIVKLVFAFAKLHGEXXXXXXXPKRSGRRRSRRSFPRTARFRPPKFG*