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SCNpilot_expt_1000_bf_scaffold_3360_8

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 8593..9852

Top 3 Functional Annotations

Value Algorithm Source
Exopolysaccharide production protein ExoQ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C295_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 410.0
  • Bit_score: 665
  • Evalue 2.90e-188
  • rbh
Exopolysaccharide production protein ExoQ {ECO:0000313|EMBL:EYR81981.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 410.0
  • Bit_score: 665
  • Evalue 4.10e-188
exoQ; exopolysaccharide production protein ExoQ similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 406.0
  • Bit_score: 557
  • Evalue 4.60e-156
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGCGGATCGCCAAGGCGCGGCTGATCGGACCGTCCGGCAACGGTGCCTATGGCGCGCTCGCCGTGGCGCTGTCCTTCTTCGTCTTCGCCTATTCCTTCCGCTTCGGGCAGGCGGCGATCCTCGTCTACTATGCGCTCTGGCTGCCGCTCGTAGCGGTGGACTACCGGCGCGTGCTCGGCAATTACGGGCATTACCTGTGGATCTTCGCCTTCGCGCTCCTCGCCTGCCTCTCGGTCTTCTGGTCCGCGGCGCCCGGCACCACGGCGCGTGCGGCGCTGCAGTACCTTTCCCACATCGTCTGCGCGCTGATCGCCATGCGCGTCGTCGATACGCGCACGCTGGTGCGCGGCGGGCTGATCGGCACCGGGCTGGTGCTCGTCTTCTCGCTTCTCTTCGGCGTCTACCATCTCGATCCGCTCGACGGCACCTACAGCTTCGTCGGCGCCTTCGCCTCCAAGAACCAGCTCGGCTTCTACGCCTCGCTCGCCGTGCTCTTCGCCTTCGCCGCGCTCTTCCTCGGGGTGGAGCGCGGTCTCTGGCGGTTCGCCGCCGTCGGCTGCGTGCTGCTGGCGCTCTATTGCCTGAAGGCCTCGCAATCGGCGACCTCGGTGCTCACCACCGCCGCCGTCGCCGGCCTGTGCCTTTCGCTGCGCGCGCTCGAGATGCTGGCGCCCTTCCACCGCCAGATGCTGTTTGCGGCGCTTGCCGTGCTTTCCGTCCTCGCCGGTCTTGCCGCCGCCTATGGCGGGGGCTACGAGCTGCTGCTCGGCGCCTTCGGCAAGGACGCGACGCTGACCGGGCGCACCTATCTCTGGCAGCAGGGCATCGCGGCGGCGGGCGAGGCGCCCTTCTTCGGCATCGGCTACCAGGCCTTCTGGGTGCAGGGCTTCGCCGAGGCCGAACGGCTCTGGGCGGCCTTCTTCATCGCCGGGCGCAGCGGTTTCCACTTCCACAACACCTTCATCGCCGCCACGGTGGAGACCGGCCTTGTCGGCTGCCTCCTCCTGACCATGGTGCTCCTCGTCACGCTCGGCGGGCACCTCGCCCGCCTGCTTTCGGCGGCGCGGGACGTGGAGGCGCTGGTGCTCTTCACGGTCGCCGCGCTGCTCGCCGTGCGTACCTTCGTGGAGATCGACATCCTCAATCCCTACCATGTCGGCTCGTTCCTGCTCTATTTCTCGGCCGGCAAGCTCGCCGACGGCCGGCGCCGCAATGCGCCGCGCCCGGCCGTGCCCCGGCACTGGATGGTGCCCGCGTGA
PROTEIN sequence
Length: 420
MRIAKARLIGPSGNGAYGALAVALSFFVFAYSFRFGQAAILVYYALWLPLVAVDYRRVLGNYGHYLWIFAFALLACLSVFWSAAPGTTARAALQYLSHIVCALIAMRVVDTRTLVRGGLIGTGLVLVFSLLFGVYHLDPLDGTYSFVGAFASKNQLGFYASLAVLFAFAALFLGVERGLWRFAAVGCVLLALYCLKASQSATSVLTTAAVAGLCLSLRALEMLAPFHRQMLFAALAVLSVLAGLAAAYGGGYELLLGAFGKDATLTGRTYLWQQGIAAAGEAPFFGIGYQAFWVQGFAEAERLWAAFFIAGRSGFHFHNTFIAATVETGLVGCLLLTMVLLVTLGGHLARLLSAARDVEALVLFTVAALLAVRTFVEIDILNPYHVGSFLLYFSAGKLADGRRRNAPRPAVPRHWMVPA*