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SCNpilot_expt_1000_bf_scaffold_4531_7

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(8356..8631)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Methylobacterium sp. 77 RepID=UPI000371B872 similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 90.0
  • Bit_score: 138
  • Evalue 2.70e-30
FadR protein {ECO:0000313|EMBL:BAQ45464.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 90.0
  • Bit_score: 146
  • Evalue 1.40e-32
GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 90.0
  • Bit_score: 130
  • Evalue 2.40e-28

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Taxonomy

Methylobacterium aquaticum → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
ATGCGCGCCCTTTCGGGCATGCTGCGGCGCGGCGTGATCGAGAACCGTGAGAAGCTTTTCCAGCGTCCCGAGACGCGCGATGCCCTGCGGGCGCAGCACAGGGCGATCTACGAGGGCGTGATGGCGGGCGATGCGGAGGCCGCGGGACAGGCGGCCGAAGCGCATATCCACTACACGCACCGGGCGCTCAAGGAGGTCAACGCAGCCGAAGCAAGGCTGGGGATTTCCCTGCGCCGCATCGGCGGCGGCAGCGTCGCTGCCTCCCGTCGCCGCTGA
PROTEIN sequence
Length: 92
MRALSGMLRRGVIENREKLFQRPETRDALRAQHRAIYEGVMAGDAEAAGQAAEAHIHYTHRALKEVNAAEARLGISLRRIGGGSVAASRRR*