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SCNpilot_expt_1000_bf_scaffold_4531_9

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 11061..12209

Top 3 Functional Annotations

Value Algorithm Source
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase n=1 Tax=Rhizobium sp. CF142 RepID=J2L8F0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 382.0
  • Bit_score: 701
  • Evalue 5.80e-199
  • rbh
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase {ECO:0000313|EMBL:EJJ29329.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 382.0
  • Bit_score: 701
  • Evalue 8.10e-199
FMN-dependent alpha-hydroxy acid dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 382.0
  • Bit_score: 679
  • Evalue 5.70e-193
  • rbh

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
ATGCGTTTGAGCAACTGTCACAATTTCCACGACTTCCGGCGCCTGGCGAAGCGTCGCCTGCCGGGACCGATCTTCAACTACATCGACGGCGCCGCCGAGGACGAGGTGACCTACCGCCGCAACACCGCCGCCTTCGAGAACTGCGACCTTCTGCCGAACGTGCTGCGCGGCGTCGATGCCGTCGATCTCTCCGTAACGGTGATGGGCCAGAAGCTCGCCATGCCCGTCTACTGTTCGCCGACCGCGCTGCAGCGCCTGTTCCACCACGAGGGCGAGCGCGCGGTGGCGGCGGCGGCCGGCAGGTTCGGCACGATGTTCGGCGTCTCCTCGCTCGGCACGATCAGCCTGGAGGAGGCCCGGCGCATCAGCCAGAGCCCGCAGGTCTACCAGTTCTATTTCCACAGGGATCGCGGCCTGAACCGCGAGATGATGGCGCGGGCCAAGCAGGCCGGCGTCGAGGTGATGATGCTGACCGTCGACAGCATCACCGGGGGCAACCGCGAGCGCGACAAGCGCACCGGCTTTGCCATTCCCTTCAGGCTCAACCTTGCCGGCGTCGCCCAGTTCGCGGTCAAGCCCGGCTGGGCGCTCAACTATTTCACGCACGAGAAGTTCAGGCTGCCGCAACTCGACAGCCATGTGGACATGGGCAGCGGCACGATGTCGATCAGCCGCTACTTCACCGAAATGCTCGACCCGGCGATGAATTGGGACGACGTTGAAGAAATGGTGCGCCACTGGGGCGGCCATTTCTGCCTGAAGGGCATCATGACGGTCGAGGATGCCCGCCGCGCCGCCGATATCGGCTGCACGGGCATCGTGCTGTCCAACCACGGCGGGCGCCAGCTCGACGGCTCGCGCAGCGGCTTCGACCAGCTTGCGGAGATCGTCGATGCCGTGGGCGACCGGATCGACGTGATGATGGACGGCGGCGTGCAGCGCGGCACCCATGTCCTCAAGGCCCTCTCGCTCGGCGCGAAGGCCGTGGGTCTCGGCCGTTACTATCTCTTCCCGCTTGCCGCCGCCGGCCAGGCCGGCGTCGAGCGCGCGCTCGAGCAGATGCGCACGGAGATCGAACGGGACATGCGGCTGATGGGCTGCGCGTCCGTCGCACAGCTCACGCGCGAGAACCTGCGGTTTCGAGCGTGA
PROTEIN sequence
Length: 383
MRLSNCHNFHDFRRLAKRRLPGPIFNYIDGAAEDEVTYRRNTAAFENCDLLPNVLRGVDAVDLSVTVMGQKLAMPVYCSPTALQRLFHHEGERAVAAAAGRFGTMFGVSSLGTISLEEARRISQSPQVYQFYFHRDRGLNREMMARAKQAGVEVMMLTVDSITGGNRERDKRTGFAIPFRLNLAGVAQFAVKPGWALNYFTHEKFRLPQLDSHVDMGSGTMSISRYFTEMLDPAMNWDDVEEMVRHWGGHFCLKGIMTVEDARRAADIGCTGIVLSNHGGRQLDGSRSGFDQLAEIVDAVGDRIDVMMDGGVQRGTHVLKALSLGAKAVGLGRYYLFPLAAAGQAGVERALEQMRTEIERDMRLMGCASVAQLTRENLRFRA*