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SCNpilot_expt_1000_bf_scaffold_4659_18

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(19295..20269)

Top 3 Functional Annotations

Value Algorithm Source
Urea carboxylase (EC:6.3.4.6) similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 324.0
  • Bit_score: 265
  • Evalue 1.70e-68
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AB-629-F11 RepID=UPI0003682DBA similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 316.0
  • Bit_score: 363
  • Evalue 1.90e-97
  • rbh
Urea amidolyase {ECO:0000313|EMBL:GAJ37525.1}; TaxID=1126627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DOA9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 307.0
  • Bit_score: 357
  • Evalue 1.90e-95

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Taxonomy

Bradyrhizobium sp. DOA9 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGAGTACGCATTCCATCACCGTCCTGAAACCTGGCCTTGAGACCACGGTTCAGGAACTGCCGGGCCGGATCGGTTACCTGGAGCAGGGGTTCCCCGTTTCCGGTCCTTTCGACAAGTGGTCGTTCCGGCAGGCGAACCTGCTGGCCGGGAACCCGCGCGATGCCGCGGCGCTCGAATGCCAGTTCCTCGGCCCCGCGCTGCGCTTCGAGTGCGACGCCGTGGTCGCGGTCACCGGCGCGGACATGCGCCCGAAACTCGACGGCCAGCCGGTGCCGATGTGGCAAAGCGTGCCGGTCGCCGCCGGACAGGTCCTGGAACTTGCCGCCGCCTATACCGGCGCGCGCGGCTACATCGCCGTCTCCGGCGGCATCGACACGCCCGTCGTGCTCGGCTCGCGCGCCGTGTTCCACATGGCGCGGGTCGGCGGCCAGGCGCTGGCGAAGGACCAGATCCTTCCGCTCGGCGCGCAGCCCACGGGTCCCCGTGANNNNNNNNNNNNNNNNNNNCCGCCGTTCCCTACCGACAGGACATGGCAGATCGAGGCGCTCGCCGGGCCGAACGACGACTGGCTGGACGACGCCTCGGTGGAGATGTTCTTCTCCGCCGACTGGTCGGTCCAGGCCAAGAGCAACCGCACGGGAATTCGCCTCACCGGGCCCGAATTCGGCTTTGCCGGGCGGGCGCTGTCGAAGGGCAGCGACCACGGCCAGGATCCCTCCAACATCATCGACCATGGCTATCCGCTGGGCGCCGTGAACCTGGCGGGCCAGACGCCCATCATCCTCGTCAACGATGCCCCGAGCACCGGCGGCTTCATCAATCCCTTTACCGTGGCCAGCGCTGCGTTCTGGAAACTCGCGCAGGCCAAGCCCGGCGACATCCTCCGTTTCCGCCGGGTCGACCGCGAGGAAGCGGCCCGCCTTCGCGCCACGCTCGAAACGGTGACAAGTGCAGGAGTGACCGTTCGTGTCTGA
PROTEIN sequence
Length: 325
MSTHSITVLKPGLETTVQELPGRIGYLEQGFPVSGPFDKWSFRQANLLAGNPRDAAALECQFLGPALRFECDAVVAVTGADMRPKLDGQPVPMWQSVPVAAGQVLELAAAYTGARGYIAVSGGIDTPVVLGSRAVFHMARVGGQALAKDQILPLGAQPTGPRXXXXXXXPPFPTDRTWQIEALAGPNDDWLDDASVEMFFSADWSVQAKSNRTGIRLTGPEFGFAGRALSKGSDHGQDPSNIIDHGYPLGAVNLAGQTPIILVNDAPSTGGFINPFTVASAAFWKLAQAKPGDILRFRRVDREEAARLRATLETVTSAGVTVRV*