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SCNpilot_expt_1000_bf_scaffold_4904_1

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(1..324)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein LuxR n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TLK4_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 108.0
  • Bit_score: 131
  • Evalue 3.90e-28
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 108.0
  • Bit_score: 131
  • Evalue 1.20e-28
Regulatory protein LuxR {ECO:0000313|EMBL:ADV13880.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 108.0
  • Bit_score: 131
  • Evalue 5.50e-28

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Taxonomy

Mesorhizobium ciceri → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGCGACCCGACCTCACCTTCGAGCAGCTCCGGCACTGGAGCAGCGGCATCACCGCTGCGGTCAGCGCCACCTTGCCCGAGGAAATCTCGGCCCATTTCACGGCCGGCGCGCGCCATCTCGTCGCCTCCGACCAAGTCTATATCGGTCTCTACCTGCGCGACAGCGCCTCGATCACCATCTACGAGCGCGATCCCGACCACTGGAACCGCAACTACGATACCCGCAAGTACCGGCAGGACCCGTTCTTCCGCCTCTTCGCCGGCACGCGGCAGGATTTCCTGCTGCCGCTTTCCGCGCTCGACAAGGGTGATTTCCACACCAGC
PROTEIN sequence
Length: 108
MRPDLTFEQLRHWSSGITAAVSATLPEEISAHFTAGARHLVASDQVYIGLYLRDSASITIYERDPDHWNRNYDTRKYRQDPFFRLFAGTRQDFLLPLSALDKGDFHTS